Metamycoplasma equirhinis: JPM7_2710
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Entry
JPM7_2710 CDS
T09202
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
meqr
Metamycoplasma equirhinis
Brite
KEGG Orthology (KO) [BR:
meqr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meqr03032
]
JPM7_2710 (topA)
03400 DNA repair and recombination proteins [BR:
meqr03400
]
JPM7_2710 (topA)
Enzymes [BR:
meqr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JPM7_2710 (topA)
DNA replication proteins [BR:
meqr03032
]
Prokaryotic type
DNA Topoisomerases
JPM7_2710 (topA)
DNA repair and recombination proteins [BR:
meqr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JPM7_2710 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BDX52664
LinkDB
All DBs
Position
334469..336307
Genome browser
AA seq
612 aa
AA seq
DB search
MSEKVMIVESPNKVSTIQKYVGDKITVVSSVGHILKLATKGVGNLGIDFENWEPNMVPDP
AKKNIISELKKITKDATEVLIATDPDREGEAIANNLVTTLKLEKKYKRIKYNEITDEAIN
FAINNPLEIDKNLVDAQKSRRMLDRIIGFKLSQLMQQKIKNTPTTPSAGRVQSIALKLVV
DKEKQIEEFIPVLYSKIDAKISDDVIAHLFFKDNLDFKNDNTWIDKQHAIDILTTLNKNL
YLDVTDYKIFERKEAAITPFKQSVLYKEAKYSSSIVQISAQKLFEAGLISYPRTDSTRMN
DSFINKAKDFIKNKFGENYVANEIKGFSGAQDAHEAIRPTDIYLTPEKAIQKHALNEVDS
YIYKIIYDKTIMALMTPPKRKVYQYELQNGIHYFKMSYTEVIFDGYYAVSGYEVVKALPE
YKIGDRVSVKEFEKLDKETTPPARYNEGSLIKMLDDIKVGRPSTFASTINIIKNRLFVEN
KNNYLHPTEFGKIVLNKLINGFPKTINEEYTAKVEEELDMISEGKENYRLLMQDFWEKFN
EHFDDVSKTIEITVLPQEIIDEKCPMCESQLLYRYTKAKHNKFIGCSNFPTCRYIKNIDQ
PKRRFWGKKSNK
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaaagtaatgattgtggaatcgccaaataaagtgagcacaattcaaaaatat
gttggcgataaaataactgttgtttcttcggtcggtcatattttaaaacttgcaacaaaa
ggtgtgggtaatctcgggatagactttgaaaactgagaacctaacatggttccagacccc
gccaaaaaaaatattatttctgaactaaaaaaaattacaaaagatgcaactgaagtcttg
atcgcaactgaccctgatcgcgaaggcgaagcaattgcaaataatttagttactactttg
aaacttgaaaaaaaatataaacgtattaaatataatgagattaccgatgaagcaataaat
tttgcaatcaataatcctctagaaattgataaaaatttagttgatgcccaaaaatcaagg
cgaatgcttgacagaattattggatttaaactttcacaattaatgcaacaaaaaatcaaa
aacacgccaactacaccttcggcgggaagagtgcaatcaatagcgttaaaacttgtagtt
gataaagaaaagcaaattgaagagtttattcctgttttatattctaaaattgatgctaaa
atttctgatgacgtaattgctcatttatttttcaaggataatttagattttaaaaacgat
aatacatgaatagataaacaacatgcaattgatattttaacaacgttaaataaaaattta
tatttagatgtaaccgattataaaattttcgaacgaaaagaagctgcaattactccattt
aaacaatcagttttatataaagaagccaaatattcatcttcaattgttcaaattagtgcg
caaaaattatttgaagctggtttaatttcatatccaagaactgattctactagaatgaat
gattcgtttataaataaagccaaagactttataaaaaataaatttggtgaaaattatgtg
gctaatgaaattaaaggtttttccggtgcacaagatgcccatgaggcaattagacctaca
gatatttatttaacacctgaaaaggcaatccaaaaacatgcgttaaatgaagttgatagt
tatatttataaaataatttatgataaaacaattatggctttaatgacaccgccaaaacgt
aaagtttatcaatacgaattacaaaacggaatacattattttaaaatgtcatatacagaa
gtgatttttgatggatattacgctgtttccggctacgaagtagttaaggcgctaccggag
tataaaataggcgacagagtctcggttaaggaatttgaaaaattagataaagaaacaact
ccacccgctcgttataatgaaggttcattaattaaaatgctagatgatattaaagtcgga
agaccttcaacattcgcttcaactattaatattataaaaaatcgtttatttgttgaaaac
aaaaataattatctgcatcctactgaatttggaaaaattgttttaaataagctaataaat
ggctttcctaaaacaattaacgaagaatacacagctaaagttgaagaagaacttgatatg
atttccgaaggtaaggaaaattatcgtttactaatgcaagatttttgagaaaagttcaat
gagcattttgatgatgtaagtaaaactattgaaataacagttctaccacaagaaataatt
gatgaaaaatgtccgatgtgcgaatctcaacttctttatcgttacacaaaagcaaaacat
aataaatttattggttgttctaattttccaacatgccgttacattaaaaatattgatcag
ccaaaacgccgtttttgaggtaaaaaaagtaataaataa
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