Metamycoplasma equirhinis: JPM7_5280
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Entry
JPM7_5280 CDS
T09202
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
meqr
Metamycoplasma equirhinis
Pathway
meqr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
meqr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JPM7_5280 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meqr03400
]
JPM7_5280 (uvrB)
DNA repair and recombination proteins [BR:
meqr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JPM7_5280 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JPM7_5280 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_7
AAA
Kinesin
AAA_22
T2SSE
ATPase
AAA_30
AAA_16
Viral_helicase1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BDX52921
LinkDB
All DBs
Position
complement(634292..636244)
Genome browser
AA seq
650 aa
AA seq
DB search
MKLISKFSPAGDQRKAIDELVEGLLENKKHQILLGVTGSGKTFTIANVINKVNRPALIIS
HNKTLASQLYSELKELFPENRVEYFVSYFDYYKPEAYIPKNDTYIEKTSKNNKELEAMRM
SSINALSIRHDTIVVASVAAIYGEFNPTQYRKNFLPLEENMLFSRKEILLKLIQMGYDRS
EALEIGQFSTKGDLIEICPGYTSNWNIRIELFGDQIDRITLVDPLTKETIEHKKSITIFP
ATTYTAINNISDICDAIEIELDEQIKYFKDNDKLLEAQRIKDRTLNDIDSIKEFGYVNGM
ENYARYVDGRDAGQRPYTLFDYLPNDAIIFVDESHMMIPQLRAMFAGDRSRKETLVKYGF
RLPSALDNRPLQFLEYEKFDFPHIYMSATPGDYELEKTESEVVTQYIRPTGLLDPQIEII
SKENQIIKIYDLIKNQILKNERTLILTTTKKNAEELSLYLQEQKIKCAYIHDKFKIFERN
EILRGLRLGKFDVVVGINLLREGIDLPEVSLVCILNADMTGLMRDARSLIQIVGRAARNE
HGKVIFFADEITGAMQEAIRDNKIKREIQQKYNIEHNIIPKTIVKAIPPALYENVSYADL
LSEKERSQIVHNKKFINGLIHKMKDLAKNKKFEEAIEIRDYLIELGIDLE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgatttcgaagttttcgcccgcaggcgatcagcggaaagctatagacgaatta
gttgaaggtcttctagaaaacaaaaaacatcaaattttgcttggagtaactggttcgggt
aaaacatttactattgcaaatgtaattaataaagtaaatagaccagcattaataattagc
cataataaaactttggcaagccagttatatagtgaattaaaagagttattccctgaaaat
agagtagaatattttgtttcatattttgactactataagccagaggcgtatatccctaaa
aatgatacatatattgaaaaaacaagcaaaaacaacaaagaattagaagctatgcgtatg
tcttccattaatgctttaagtattcgccatgacactatcgttgtcgcttccgttgcggct
atttatggcgaattcaatccaactcaatatcgaaagaattttttgccgcttgaagaaaat
atgttattttctcgcaaggaaatattacttaaattaattcaaatgggttatgatcgaagt
gaagcattagaaattggtcaatttagcacaaaaggcgatttaattgaaatttgccctgga
tatacgtcaaattgaaatattagaattgaattatttggtgatcaaattgatagaataaca
ttggtcgaccccttaacaaaggaaactattgagcataaaaagtcaattacaattttccca
gcaacaacatatacagctataaataatattagcgatatttgtgatgctattgaaattgaa
ttagacgaacaaataaaatattttaaagataatgataaattgctagaagcacaacgcatc
aaagatagaactttaaatgatattgattcaataaaagaatttggttatgtaaatggaatg
gaaaattatgcccgatatgttgatgggcgcgatgctggtcaaaggccatatacattattt
gattatttaccgaatgacgcaataatatttgttgatgaaagccatatgatgattccacaa
cttcgcgcaatgttcgctggcgatagatcaagaaaagaaacgttagttaagtatggtttt
agattaccatcagccctagataatcgccccttacaatttttagaatacgaaaaattcgat
tttcctcacatatatatgtccgcaactcctggtgattatgagcttgaaaaaaccgagagt
gaggttgttactcaatatattaggccaacaggtttgttagatccgcaaattgaaataatt
tcaaaagaaaatcaaattattaaaatttatgacttgataaaaaatcaaattttaaaaaat
gagcgaacacttattttgacaaccacgaaaaaaaatgctgaagaattatcactttatttg
caggaacaaaaaatcaagtgtgcctatatccacgacaaatttaaaatttttgaacgtaat
gaaattttaaggggattacgtttagggaaatttgatgttgtagtcggaataaatttgttg
cgtgaaggaatcgatttaccggaagtgagtttagtttgcattttaaacgctgatatgaca
ggattaatgcgtgatgcacgtagtttgattcagattgttggccgagccgccagaaacgaa
catggtaaggttatatttttcgctgacgaaattacaggtgcaatgcaagaggcgattcgt
gataataaaataaaacgtgagattcaacaaaaatacaatattgagcataatattattccc
aaaacaattgttaaagcaataccgcctgctttatatgaaaatgtttcatatgctgactta
ctttctgaaaaagaacgctctcaaattgtacataataaaaagtttataaatggattaatt
cataaaatgaaagatttggccaaaaataaaaaatttgaagaagcaattgagattcgggat
tatttaattgaattaggaattgatttagagtag
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