Macrococcus equipercicus: KFV11_06845
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Entry
KFV11_06845 CDS
T08514
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mequ
Macrococcus equipercicus
Pathway
mequ03030
DNA replication
mequ03430
Mismatch repair
mequ03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mequ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KFV11_06845 (holA)
03430 Mismatch repair
KFV11_06845 (holA)
03440 Homologous recombination
KFV11_06845 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mequ03032
]
KFV11_06845 (holA)
03400 DNA repair and recombination proteins [BR:
mequ03400
]
KFV11_06845 (holA)
Enzymes [BR:
mequ01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KFV11_06845 (holA)
DNA replication proteins [BR:
mequ03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KFV11_06845 (holA)
DNA repair and recombination proteins [BR:
mequ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KFV11_06845 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
GemA
LCIB_C_CA
Motif
Other DBs
NCBI-ProteinID:
UTH12994
UniProt:
A0A9Q9BPD8
LinkDB
All DBs
Position
complement(1316655..1317656)
Genome browser
AA seq
333 aa
AA seq
DB search
MKLRFNKGAVILKAITLNYGVVPELVAEKTREIVDELLPDQDDFNFAKYDLHEVPVQQII
EDAMTIPFLSDYKVIVVKNSYIFTGDRGKTAVEHSLEALVEFITRFDGPNYVIFEVNHDK
LDERKKIVKLMKQQHQVNKIEAMDEHALRQWIKKSLNEQFKDIKQDALDELIQLTGADYK
LITNELEKLLLYVGDEPIIVLSHVKLIVSRSLEQNVFLLTDYITTNRKKEAVQLLHDLIN
MKEEPIKLLALISGQYRLYYQTKILNQKGFSEAQIAKSLKIHPYRVKLALRKVGRLDLSH
ILGIMEKCTETDYQLKSSYMDKVLILELFILSI
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaagatttaataagggagcagttattttgaaagctataactttaaactatggt
gtcgtgcctgaactggtagcagaaaaaacacgggaaatcgtagacgaactgctgcctgac
caggacgattttaactttgccaaatatgatctgcatgaagtgccggtgcagcagatcatc
gaagatgccatgacgataccatttttaagcgattataaagtcatcgtcgttaaaaacagc
tatatcttcaccggtgaccgggggaaaacagcagtggagcattcgctggaggcacttgtt
gagttcatcacccgtttcgatgggccgaactatgtcatttttgaagtgaatcatgacaag
ctggatgagcgcaaaaaaatcgtgaaattgatgaagcagcagcatcaagtcaataagatc
gaagccatggatgaacatgcgctccgccagtggattaaaaaatcgctgaacgagcagttc
aaagatatcaagcaggatgcccttgatgaactgattcagctgacaggggctgactataaa
ctgatcacaaatgagcttgagaagctgctgctctatgtcggtgacgaaccgatcatcgtc
ctcagccatgtgaagctgattgtctcgcgcagccttgagcagaacgtctttctgctgacc
gattatattacgacgaaccgcaagaaagaagcagtccagctgctgcatgacctgatcaac
atgaaggaagagccgatcaaactgctggcactgatcagcgggcagtatagactgtactac
cagacgaaaattttaaatcagaaagggttcagtgaagcgcagatcgctaaaagcctgaaa
atacatccttaccgggtgaaactcgccctgagaaaagtaggtcgcctggatctctcacat
atactaggtatcatggagaaatgcacggaaacggattatcagctgaagtcctcttacatg
gataaagtgctgatacttgaattgtttatactgagcatataa
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