Macrococcus equipercicus: KFV11_09880
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Entry
KFV11_09880 CDS
T08514
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mequ
Macrococcus equipercicus
Pathway
mequ03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mequ00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KFV11_09880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mequ03019
]
KFV11_09880
03009 Ribosome biogenesis [BR:
mequ03009
]
KFV11_09880
Enzymes [BR:
mequ01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KFV11_09880
Messenger RNA biogenesis [BR:
mequ03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KFV11_09880
Ribosome biogenesis [BR:
mequ03009
]
Prokaryotic type
rRNA helicases
KFV11_09880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Flavi_DEAD
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UTH13517
UniProt:
A0A9Q9BUV6
LinkDB
All DBs
Position
complement(1857007..1858509)
Genome browser
AA seq
500 aa
AA seq
DB search
MQKFRELGISEPTINALEKLGFTDPTPIQLDSIPHTMAGRDVLGQAQTGTGKTGAFGIPL
IEKVKNNEGIQSLILAPTRELAVQVADQLKAFGRGQGIQVTTIFGGMPIDRQIRELKKKP
QIVVGTPGRVIDHLNRRTLKTDQINTLILDEADEMMNMGFIDDMRFIMDKLPKENRQTLL
FSATMPKAIQELVQKFMNDPIVVKTMTNVDSNPDIDEYYTIVKELEKFDTFTSFLDVHSP
ELAIVFGRTKRRVDELTSALISKGYRAEGLHGDITQAKRLEVLKKFKNDAIDILVATDVA
ARGLDISGVSHVYNFDIPQDVESYTHRIGRTGRAGKHGMAISFVNPIEMDYIRQIEKEKN
RTMKALRPPTPGEVMKARESEVKKKVAEWVAKPSEERVESIAANLLEEYGDVKLVTALLQ
ELIQSNSEVDVQLTFEKPLGRKGGKSSYGRRGGSAGGSRNFKPGQKRRDSKDGRRKPHDR
SAGASKPKTFKGRTFADHKK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaatttagagaattaggtatcagcgagcctacaatcaatgcgctggaaaaatta
gggtttacagatcctacccctatccaattggatagtattccccacacaatggcgggaaga
gacgtacttggtcaagcacagacaggtactggtaaaacgggtgcattcggtattccgttg
atcgagaaagtaaaaaataatgagggcatccaaagtttaattctggcgccgactcgtgaa
cttgctgtgcaggtggctgaccagctgaaagcattcggccgcggccaaggcattcaagtg
acaactattttcggtggtatgccgattgaccgtcagatcagagagctgaagaagaaacct
caaatcgttgtcggtacaccaggacgtgtcatcgaccatttaaaccgtcgtactttaaag
acagaccagatcaatacattgattcttgatgaagcagatgaaatgatgaacatggggttc
atcgatgatatgcgtttcatcatggataaactaccgaaagaaaaccgtcagacattactc
ttctcagcgacaatgcctaaagcgatccaggaacttgttcagaagttcatgaatgatcct
atcgttgttaagacgatgacaaacgtcgattctaatccggatatcgatgaatattacaca
atcgtcaaagaacttgagaagttcgatacattcacaagcttcctcgatgttcacagccct
gaacttgcaatcgtcttcggccgtacaaaacgccgtgttgacgaactgacaagcgcgtta
atttctaaaggctaccgtgcagaaggtcttcacggtgacatcactcaggcgaaacgtctt
gaagtactgaaaaaattcaagaacgatgcgatcgacatcctcgttgcaacagacgttgct
gcacgtggattagatatctcgggcgtatctcacgtctataacttcgatatcccgcaggac
gttgaaagttacacgcaccgtatcggtcgtacaggccgtgccggtaaacatggtatggcg
atttcattcgtcaacccgatcgaaatggattatatccgtcagatcgaaaaagagaagaac
cgcacgatgaaagccctgcgtccaccaacaccaggcgaagtgatgaaagcccgcgaaagc
gaagtgaagaagaaagttgctgaatgggtggcgaaaccttctgaagaacgcgttgaatct
atcgcagctaatctgcttgaagaatatggtgacgtgaaattagtcactgctctgctgcag
gagctgattcagtcaaacagcgaagtcgatgttcaattgacattcgaaaaaccacttggc
cgtaaaggcggtaaatcatcttacggacgtcgcggcggcagcgcaggcggcagccgaaac
ttcaaaccgggtcagaaacgtcgtgacagcaaagacggtcgtcgtaaaccacatgaccgc
agtgctggcgcaagcaaaccaaaaacattcaaaggccgtacatttgcggaccataaaaaa
tag
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