Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1: MMINT_02330
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Entry
MMINT_02330 CDS
T02692
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mer
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
Pathway
mer03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MMINT_02330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mer03400
]
MMINT_02330
Enzymes [BR:
mer01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MMINT_02330
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MMINT_02330
DNA repair and recombination proteins [BR:
mer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MMINT_02330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
DNA_ligase_ZBD
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
AGN25635
UniProt:
R9T4G4
LinkDB
All DBs
Position
251741..252565
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVETVVNVLKPQIIDLTVSRITINKPQVIAYPAVEEFCTRLTGQKISGMKRRGKF
IIICFASGDQLILHLRMTGCLLVTPAEDNIADHTHVIFELENNTQLRFIDTRRFGRFWMI
KKGEEDNVSGINKLGIEPFDAVLTADYLQSILSNRKKTIKECLLDQSLIAGIGNIYSDEI
LFRANIDPMRKANTLNSCELERLAAEIPRTLKYYMEKNEITPEEYLKKQGRGYNNSSFLN
VYGQDNKLCPVCGEILHRRVIGGRSSVYCQNCQK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcctgaagttgagactgtggtaaacgtattgaaaccgcagatcattgat
ctgacggtatcaagaattactataaacaaacctcaagtaatcgcatatcctgctgttgaa
gagttttgtactaggctcacaggacagaagatttccggcatgaagcgcaggggtaaattc
atcattatttgttttgcaagtggcgatcaattgatactccatctgcggatgaccggctgc
ttgttagttactcctgcagaagacaatattgcagaccacacgcatgttatttttgaatta
gaaaacaatacgcaacttcggtttattgacacacgccgtttcggccgattctggatgatt
aaaaaaggagaagaagacaacgtttctggcatcaataaactcggtatcgagccgtttgat
gcagttttgacagcagactatctgcagagtattctttctaatcgaaaaaagacaatcaag
gaatgcctgctggatcaaagtctaattgcaggaatcggtaatatttacagtgatgagata
ttgttccgcgcaaatattgatcctatgaggaaggccaacacattaaacagctgtgaattg
gaaagactggccgcagagattccaagaaccttgaagtactatatggaaaaaaatgaaatt
acgcctgaggagtatcttaaaaaacagggccgcgggtacaataattcttcattcctcaac
gtatacgggcaggataataagctatgtccagtatgcggagaaattcttcaccgcagagtt
attggaggacgcagcagcgtctattgtcaaaactgtcaaaaatga
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