Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1: MMINT_02870
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Entry
MMINT_02870 CDS
T02692
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
mer
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
Pathway
mer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mer00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MMINT_02870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mer03019
]
MMINT_02870
03012 Translation factors [BR:
mer03012
]
MMINT_02870
Messenger RNA biogenesis [BR:
mer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MMINT_02870
Translation factors [BR:
mer03012
]
Eukaryotic type
Release factors
MMINT_02870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
DegS
HypA
DZR
DUF7130
DUF5817
PaaB
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AGY50156
UniProt:
U5Q1W7
LinkDB
All DBs
Position
301154..302407
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AA seq
417 aa
AA seq
DB search
MVADEGDYERQMEKRRYDFKRALEEIRDIHGRGTELVSVYVPPDKQISDVANYLRGELSQ
SQNIKSKRTQKAVSGAIESILARLKYFKTPPPNGVIFFIGEAPTSGDQTKQVQFVLEPPE
PITSFMYRCDSEFYTEKLWDMLDDKETFGLLVIDRSEATVGLLKGTSIIVLKNVQSFVPS
KHGRGGQSALRFERLIEIAAHEFFKKVAEIADDAFLNQESLLGILIGGPGDTKKFFITEE
YLNHELRKKVLDPVDTSYTDEYGLKELVENAKTILTDLSLNREKELMQRFFRELRKPDGG
LSCYGEDEVRHALALGAIDTLLISEGIRLKRVKINCQNCGEMELTVPDEDHIQCPNCKSP
TPPEILESKDFIDAFYDEADQVGTKVELLTVDSEEGDILLRAFGGIVAMLRYNIGGM
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggttgctgacgagggcgattatgaaagacagatggaaaagcgcaggtatgattttaaa
cgcgcgttagaagagattagggatatccatggtcgcggaacagaactcgtctctgtttat
gtgcctcctgacaaacaaatatcagatgtggcaaactacctcaggggagaattatcacaa
tcacagaacatcaaaagcaaacgtactcaaaaagccgtgtcaggtgctattgagtcaata
ttggccagattaaagtactttaaaaccccaccgccaaacggggttatatttttcattgga
gaagctccgacatctggagatcaaacaaaacaggtacagtttgtactggaacctccagaa
ccgattacctcttttatgtaccgatgtgattcagagttctatactgaaaagctttgggac
atgcttgatgataaagaaacatttggtcttctcgttatagaccgatctgaagctacagta
ggtcttctgaaaggtacaagtataattgtactgaaaaatgtccagtcattcgtgccatcc
aagcatgggcgaggaggacagtccgcgcttcgttttgaacgtttgattgaaatagcggct
catgaattctttaagaaagtcgcagagattgcagatgatgcatttctaaatcaagaatcc
ctgcttggaattctcattggagggccgggggacactaagaagttcttcattactgaagaa
tatctcaaccatgagttgaggaaaaaagtcctcgatcctgtagatacaagttacacagat
gaatatggtctgaaagagcttgtagaaaatgcaaagactattctgaccgatctgagcctt
aaccgtgagaaagaattgatgcagcgttttttcagagaactgaggaaaccagatgggggc
ttatcgtgctacggtgaagacgaagttcgccatgcattagctctgggagctatagatacg
ctgctgatttctgaaggtatacgattaaaacgggtaaaaataaactgtcaaaactgcggt
gaaatggaactgacagttcctgatgaagatcacatacagtgcccgaattgcaaatctcct
acacctccagagatcttggaatcaaaggatttcatcgatgcattctacgatgaggctgat
caagtgggaaccaaggtagagcttcttacggtagattcggaagaaggggatattcttctg
agagcatttggcggtattgtagctatgctgcgttacaacatagggggaatgtaa
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