Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1: MMINT_04590
Help
Entry
MMINT_04590 CDS
T02692
Name
(GenBank) H/ACA RNA-protein complex component Cbf5p
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mer
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
Brite
KEGG Orthology (KO) [BR:
mer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mer03016
]
MMINT_04590
Enzymes [BR:
mer01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MMINT_04590
Transfer RNA biogenesis [BR:
mer03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MMINT_04590
Prokaryotic type
MMINT_04590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
UPF0113
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AGN25840
UniProt:
R9T540
LinkDB
All DBs
Position
456006..456962
Genome browser
AA seq
318 aa
AA seq
DB search
MSEMLIRDKSPLPLNAGKKPTERTIEELLDAGVINMDKPQGPTSHQATAWVREILGVDKI
GHGGTLDPKVSGVLPIATGRAVRSVNLTLKSEKEYVCIMRLHRDADETEIRDVISTFVGR
IYQVPPVRSAVKRQLRIRTIHYINILDINGRDVLFRVGCDAGTYIRTLCVDIGDALGVGA
TMEDLRRTKSGSMLESESVTLQDIKDAYVMWKDENDESWLRSIIQPFEVLFDPLPKIIVK
DSAVDAVCHGADLAAVGIAQIDSSIQKEATVAMFTLKGEAIGVGSAKMSCDEMMKAKEGI
AVKTERVYMPASTYPKTW
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaatgctcatccgtgacaagagtcctcttccactaaatgcaggaaaaaaacca
accgaacgcacaatcgaggagcttttggatgctggcgttataaacatggataaacctcaa
ggccccacttcacatcaagccactgcatgggtcagagaaattcttggtgttgataagatc
ggtcatggcggcactcttgatcctaaagtttcaggagtcttgccaatcgctacaggccgg
gcagtcagatctgtaaatctcactctaaaatctgaaaaagaatatgtctgtataatgaga
cttcatcgtgatgcggatgaaactgagattagagatgtaatctccacttttgtaggaaga
atctatcaagttccaccagtgagatctgcagtgaaaaggcaactgagaatcaggactatt
cactacataaacatcctggatatcaatggtcgtgatgttctttttagagttggatgtgat
gctggcacatacatacgaactttgtgtgtagacataggcgatgctttaggtgttggagca
actatggaagatctgagaagaactaaatctggttccatgctggaaagcgaatctgtcacc
ctgcaggatatcaaagatgcatatgttatgtggaaagatgagaatgatgagagctggttg
cgcagcatcattcaaccatttgaagttctgttcgatccccttcctaaaataattgtcaaa
gacagcgccgttgatgcagtttgtcatggtgctgatttagcagcagtcggcatagctcag
attgattcttcaattcagaaagaagcaacagtggcaatgtttacactcaaaggtgaagct
atcggagtcggatcggcaaaaatgtcctgcgatgagatgatgaaagctaaagaaggcatc
gccgtaaagaccgaacgcgtttacatgccagcaagcacctacccaaaaacttggtag
DBGET
integrated database retrieval system
