Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1: MMINT_04760
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Entry
MMINT_04760 CDS
T02692
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
mer
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
Pathway
mer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMINT_04760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mer03019
]
MMINT_04760
Messenger RNA biogenesis [BR:
mer03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MMINT_04760
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
MMINT_04760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF3867
Motif
Other DBs
NCBI-ProteinID:
AGN25858
UniProt:
R9T906
LinkDB
All DBs
Position
complement(469228..470016)
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AA seq
262 aa
AA seq
DB search
MSGMTTDIELVNKDGIRIDGRTAEEMRPLRIEAGVLNNADGSAYLEWGKNKVLCAVYGPR
ECHPRHMQNPTKAIVQCKYNMLSFSVSDRKRPGPDRRSIEISKIISEALEYVIFTENYPR
ASIDVYIEVLQANAGTRCAGLTAASVALADAGIPMKDLVPAVAIGKADGHIVLDLNKEED
NFGNADLPIAMIPRTGEVLLMQMDGHMTMEEFNTALEYGKKACEKVYEIQKDALKRKYSI
QSEDTEEPEPTADEDHNEEGDE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaatgacaactgatattgaattagttaacaaagatggaattaggattgatgga
aggactgcagaagaaatgcgtcctttaaggatagaagctggcgtattaaacaatgcagac
ggatctgcatatttggagtggggtaaaaacaaggtattatgtgctgtatacggcccaaga
gaatgccacccaagacacatgcagaatcccacaaaagcgattgtacaatgcaaatacaat
atgctttcattttctgtatctgacaggaaaagacctggcccagacagaagatccatagag
atatcaaagatcatatctgaagctttagagtatgtgatttttacagagaattatccccgc
gcatcaattgatgtatatatcgaagtcctgcaggccaatgcgggtacaagatgcgcaggt
ctaacagctgcctcagtggcactggcagatgcaggtattcccatgaaggatcttgttcct
gctgtagcaataggcaaagctgatggccacatagttcttgatctaaataaggaagaagat
aactttggaaatgcagacttaccgatcgctatgatcccaaggactggcgaagtcctcctg
atgcagatggatggccatatgacgatggaagagttcaatactgcactggaatatggtaaa
aaagcatgtgaaaaagtttacgagatccagaaagacgctctgaaacgtaaatattcaatc
caatcagaagatacagaagaacctgaacccaccgctgatgaagaccataatgaagaaggt
gatgagtga
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