Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1: MMINT_05310
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Entry
MMINT_05310 CDS
T02692
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mer
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
Brite
KEGG Orthology (KO) [BR:
mer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mer03016
]
MMINT_05310 (truD)
Enzymes [BR:
mer01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MMINT_05310 (truD)
Transfer RNA biogenesis [BR:
mer03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MMINT_05310 (truD)
Prokaryotic type
MMINT_05310 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGN25911
UniProt:
R9T8C4
LinkDB
All DBs
Position
520669..521973
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AA seq
434 aa
AA seq
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MQECRGAEAEIGLEVFFTDSPGIGGRLKQTPEDFIVDEISLPPAEDDSGSYSIAKVTSQN
WETNRLVRELSKTLRISRDRIGFAGTKDKRGITSQLMSFQASVDDVRNLNLHQISISDVY
RSKKPLTIGDLIGNKFIIKCRNSALSKDEIQASISQTESQLSELGGFPNFFGVQRFGAVR
PVTHLVGKWIAKGDLEKAVMTYVANPMPSEGGDTREARAQLELDGDFERALEYYPKTLTF
ERMMIGYLVRNPGDYAGSIEILPPNLQMMFIHAYQSYLFNKMLSERIRLDLPLNKPVIGD
VVLPVDRSGLPDHDHGVPTTENNIDLVERQVKKGKAFISSVLFGTDSTFSEGTPGEIERK
IIEEEKLSSSDFMIPLIHQCSSKGSRREILGTISDMESRVLDDCTLFSFSLNKGCYATVV
LREFMKNGTLMDYS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaatgcagaggtgcagaggctgaaataggcctcgaagtattttttacagactct
ccagggatcggaggtaggctcaaacaaacccctgaggattttatagttgatgaaatatcg
ctgcctcccgctgaagatgacagcggctcatattccatagctaaagtaacttctcaaaat
tgggagaccaaccgcttggtaagagaactttctaaaacactaagaatcagcagagataga
attggctttgctggtactaaagataagagaggaataacatctcaattaatgtcttttcaa
gcttctgtggatgatgtcaggaacttaaacctccatcagatatctatttcagacgtatac
agatcaaaaaaacctctgacaatcggtgacttgattggaaacaaattcattataaaatgc
cgtaattctgcactcagcaaagatgaaattcaagcttctatttcccagacagaatctcag
ctttcagaactgggaggatttcctaatttttttggtgtgcagagatttggggcagtcagg
ccagtaacacacctggtaggaaaatggatagctaagggtgatctggaaaaggctgttatg
acatatgttgcaaatcctatgccttcggaaggaggcgatacacgggaagccagagcgcag
ctagagttggatggggattttgaaagggctctggaatactatccaaaaacacttacgttt
gaacgtatgatgatcggctaccttgtgagaaatcctggagactatgcaggttcgatagaa
atccttccacccaatcttcagatgatgtttatccatgcataccaatcatatctttttaac
aagatgttaagcgagcgtatcagattggatcttcctttgaacaagccagtaattggtgat
gttgtgctaccagtagacagaagcggtctgcccgatcatgatcatggtgtaccgactact
gagaataacattgatcttgttgaaaggcaggttaaaaaaggaaaagcgttcataagttct
gtattgtttggtactgattcaacattttctgaaggaactcctggagagatcgaaagaaag
ataattgaagaagagaagctgtcttcttctgattttatgatcccgcttatccatcaatgc
agctctaagggaagcagaagagaaattttaggaacaatctcggatatggagagtcgtgtg
cttgatgactgcacacttttttcattctcattgaacaaaggatgctatgctacagtagtg
ttgagagagttcatgaagaatggaactttaatggattatagctga
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