Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1: MMINT_14960
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Entry
MMINT_14960 CDS
T02692
Name
(GenBank) AAA family ATPase, CDC48 subfamily protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mer
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
Pathway
mer04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MMINT_14960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mer03019
]
MMINT_14960
03009 Ribosome biogenesis [BR:
mer03009
]
MMINT_14960
04131 Membrane trafficking [BR:
mer04131
]
MMINT_14960
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mer04147
]
MMINT_14960
Messenger RNA biogenesis [BR:
mer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MMINT_14960
Ribosome biogenesis [BR:
mer03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MMINT_14960
Membrane trafficking [BR:
mer04131
]
SNARE
SNARE associated proteins
Others
MMINT_14960
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MMINT_14960
Exosome [BR:
mer04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MMINT_14960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_2
CDC48_2
TIP49
AAA_14
AAA_22
AAA_33
Mg_chelatase
NPHP3_N
AAA_28
nSTAND3
RNA_helicase
Zeta_toxin
IstB_IS21
AAA_7
NACHT
Sigma54_activat
AAA_24
TsaE
AAA_17
ABC_tran
AAA_18
AAA_3
Parvo_NS1
DUF815
Bac_DnaA
AAA_11
SLFN-g3_helicase
ATPase
DUF5906
NB-ARC
PhoH
AAA_lid_PRS2_C
AFG1_ATPase
ATPase_2
KAP_NTPase
AAA_30
bpMoxR
AAA_19
SecA_DEAD
Type_III_YscX
Zot
CooT
Motif
Other DBs
NCBI-ProteinID:
AGN26809
UniProt:
R9T831
LinkDB
All DBs
Position
complement(1487563..1489707)
Genome browser
AA seq
714 aa
AA seq
DB search
MKNDDKVLKVAEARSKDAGRGIARIDSAVMDILGITAGDVIQIEGKKRTAAIAWPGLPED
TNKGIVRIDGTLRRNADTGIDDRISIRKISAKEATKITVAPTKALRIVGGEEYLRQILNG
RVIVKGDIVEVNTLEGRIDLVVTNCSPVADALIVKSSTEFTISEKPASETPSVPRISYED
IGGLGDEVKKVREMIELPLRHPELFERLGIEAPKGVLLHGPPGTGKTLLAKAVASETNAN
FMTIGGPEIMSKYHGESEEHLREIFKQAQENAPTIIFIDEIDSIAPKREEVTGETERRVV
AQMLSLMDGLESRGKVVVIGATNRPNALDPALRRPGRFDREIEIGVPDKAGRLEILQIHT
RGMPLEDGIDLDKFANLTHGYVGADLSALCKEAAMRSLRRILPELNLEDDIIPIEILNKI
TVSEDDFMGALMEMQPSSMREVLVERPNVHWVDIGGLEDAKRQLREAVEWPLKYGKVFRK
MNAAPPKGILMYGPPGTGKTMLAKAVATESEANFISIKGPEFLSKWVGESEKAVRETFRK
ARQASPCVIFMDEIDSIATSRGSGDDSHVTERVISQLLTELDGLEGLQDVVVIAATNRPD
MIDPALLRPGRFDRMVEIGLPDLESRKSILAIQTANTPLADDVDLTAVADKTEGYTGADL
SAVVNEAIMDAVRELVKSDDISDERLNEAKVSMSSFLSAIEKLNPANRKAENYL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgatgataaagtgttgaaggtggctgaagcacgctccaaggatgccggccgc
ggaatagcacgtattgactctgcagtaatggatattttaggtataaccgcaggagacgta
attcaaatcgagggaaagaaaagaactgcagctatagcttggccaggactacccgaagat
actaacaaaggaatcgtaaggatcgatggaacattaaggagaaatgccgacactggtatt
gacgatcgcatttccattcgcaaaatctcagccaaagaagctacaaaaattactgtagcg
cctaccaaagctctaagaatcgtaggcggagaagaatacctccgtcagatactgaacggg
agagtaatcgtcaaaggggatattgttgaagtcaacactctagaaggacgcattgatctg
gtcgtgaccaactgcagcccggtagcagatgccttaattgtcaaatcctccaccgaattt
acgataagtgaaaagccagcgagcgagacaccgtcagtcccaaggatttcctacgaagat
attggaggtttaggcgacgaagtcaaaaaagtaagggaaatgatcgaactgccgcttagg
catccagagttatttgaaaggcttggaattgaagctcctaaaggagtccttctgcatggt
cctcctggaacaggcaaaacgctgctggctaaagcagtagcatcagagaccaatgccaat
ttcatgacaatcggcggacctgagatcatgtcaaaatatcatggggaaagcgaagagcat
cttcgtgaaattttcaagcaggctcaggaaaatgcgccgaccattatattcatagatgaa
attgattccatagcgccaaagcgtgaagaagttacaggggaaacagaaagaagggtagta
gcccagatgctgtctttgatggatggtctggaatcccgcggtaaggtggtagtcatcgga
gctaccaacagaccaaacgcactcgatcccgctcttaggcgtccaggcagatttgaccgt
gagatcgaaatcggagttccagataaagcaggccgcctagagattctgcagattcatacg
agaggtatgcctttagaagatggaatcgatcttgataagtttgcaaatcttactcatgga
tacgtgggagctgatctctctgcattgtgtaaagaggcagcaatgagatctcttcgcaga
atccttccagagcttaatctcgaagacgatatcattccgattgagatcctaaataaaatc
acagtctctgaagatgacttcatgggcgcgcttatggaaatgcagccatcttccatgagg
gaagtgctcgttgagcgtccgaatgtccactgggtagatatcggcgggttagaggatgct
aaacgccagttgagagaagctgtggaatggccacttaagtatggaaaagtcttcagaaaa
atgaatgcagccccacctaaagggatcttgatgtacggccctccaggtacaggtaagacc
atgcttgcaaaagcagttgctacagagtctgaagcaaacttcatctccataaaaggtccg
gagtttcttagcaagtgggtgggtgaatccgaaaaggccgtgagagaaactttccgtaaa
gccaggcaggcgtctccatgtgtaatattcatggatgaaatcgactccatcgctacatct
cgtgggagcggtgacgattcacacgttactgaacgtgtgatctcacagctgctcacagag
ctggatggtcttgaaggacttcaggatgtcgtagtaattgccgcaaccaaccgtccagac
atgatcgatccagctttactgcgtccaggcagatttgaccgcatggtggaaataggccta
cctgatttagagagccgtaagagcatcttagccatacagaccgcaaatacaccattggca
gatgatgtcgacctcacagcagttgcggataaaacagagggatacacaggagccgatttg
tctgctgttgttaatgaggcgattatggatgccgtaagagagcttgtcaagagtgatgac
atatcagatgagcgcctgaacgaggctaaagtttcaatgtcttcattcctctctgctata
gaaaaattaaaccctgcaaacagaaaagctgaaaactatctgtga
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