Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1: MMINT_16280
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Entry
MMINT_16280 CDS
T02692
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mer
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
Pathway
mer03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MMINT_16280 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mer03021
]
MMINT_16280 (tfb)
Transcription machinery [BR:
mer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MMINT_16280 (tfb)
Prokaryotic type
Archaeal type
TFB
MMINT_16280 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Lar_restr_allev
UPF0253
HTH_AsnC-type
FtrD-like
A2L_zn_ribbon
HTH_Tnp_ISL3
HTH_24
Zn_ribbon_LysW
DUF7573
Desulfoferrod_N
Motif
Other DBs
NCBI-ProteinID:
AGN26928
UniProt:
R9TBU2
LinkDB
All DBs
Position
1628478..1629410
Genome browser
AA seq
310 aa
AA seq
DB search
MPKVREGTEEIEKCEACGSRHLVRDYERGELVCEDCGMVLDDQFIDQGPEWRAFDVEQGE
KRARTGAPMTYTIHDKGLSTEISWKNKDSYGKSIPTRNRAQLYRLRKWQRRIRVSNATER
NLAFALSELDRMASAMGLPRNVRETAAMIYRKAVNKNLIRGRSIEGVVAASLYAACRQCN
VPRTLDEVATSSRVGRKEIGRTYRFMTRELKLKLMPTKPQDYVQRFCSELKLSGEVQTKA
AEILKDAAKKELTSGRGPTGVAAAAIYISSILCNERRTQREVADIAGVTEVTIRNRYKEL
TEKLGIEIQL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggtaagagaagggaccgaagaaattgaaaaatgtgaagcgtgcggaagccgc
cacttggtacgtgattatgagcgtggggaactagtctgcgaagactgcggaatggtgctc
gatgatcagttcatagaccagggtcccgaatggagagcatttgacgtagaacagggagaa
aagcgtgccagaactggtgcgcctatgacttacacgatacatgataagggtctctctacc
gaaatttcttggaaaaacaaggacagttatggtaagagcattcctacaagaaaccgtgcc
cagctctatcgtctgaggaaatggcagaggagaataagagtttcaaatgccacagaaaga
aacttggcatttgctctgagcgaattagacagaatggcatctgcaatgggtcttcccaga
aacgtgagggaaactgcagcaatgatttatcgtaaagcagttaacaagaacctcatcaga
ggaagaagcattgagggagtcgtagcagcttcgctgtatgcggcatgcagacagtgcaat
gtcccgagaactctggacgaagtagcaacttcatcacgtgtcggcaggaaagaaatcgga
agaacatacagattcatgacgagagagctcaaactcaaactgatgcctacaaaaccgcag
gattacgtgcagaggttctgttcagaactgaagctgagcggcgaagtgcagacaaaagca
gcagaaatcctcaaagatgcagctaaaaaagagcttacatccggaagaggaccgactggt
gtagctgcagcagctatctacatctcatcgattctgtgcaatgagcgcaggacccagaga
gaagtggcagatatcgccggtgttactgaagtgacaatcagaaaccgttacaaagagctc
actgaaaaactcggcatcgagattcagctttaa
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