Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1: MMINT_17160
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Entry
MMINT_17160 CDS
T02692
Name
(GenBank) tRNA splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mer
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
Brite
KEGG Orthology (KO) [BR:
mer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mer03016
]
MMINT_17160
Enzymes [BR:
mer01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MMINT_17160
Transfer RNA biogenesis [BR:
mer03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MMINT_17160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
AGN27008
UniProt:
R9TC22
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All DBs
Position
1699269..1700321
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AA seq
350 aa
AA seq
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MPGELEEDRVMIKDSAEASTIYNKGCYGYPMSGGGLELDLMEASYLVESNRLEVVNSDGP
ITLEDLIRAASLIHRDFEIDYTVYRDLRQRGYIVKTGGDFNFRLFPRGGTPNNSQTKSWV
MSVSERATFQIDPFVASIEQADQTRKELLTGVVDEEGDITYYHPCKSEPKGNVNVKWEGG
PAVASLMEDRVLVFDQKSVEKLQDHGYYGKQTGAVLQLSLIEAAHLMEKGWLEVIRIASN
RRINTDRFKKRALKFQPDFDLRLAVYNDLRSRSLIVKTGFKYGSHFRVYDDDPDKTHARW
LVHSIPNDYETIWPEISRAVRLAHGVKKEILFARVSSEKIEYIKLTRVRP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcctggagagcttgaagaagatcgggtaatgattaaagactcagctgaagctagtaca
atctacaacaaagggtgctatgggtatcccatgtctggcggaggcttggagcttgacctg
atggaggcatcatatcttgttgagtcaaaccggctggaagtcgtgaacagcgatggccct
ataactctggaagatctgattagagcggcatcgctgatccacagagattttgagatagat
tacacagtgtacagagatctaaggcagaggggatacatagttaaaacaggcggggacttt
aatttccgtttgttcccgcgaggcggaacaccaaataactctcaaaccaaaagctgggta
atgtctgtaagtgagcgtgcaacttttcagatcgatccttttgtagccagcattgaacaa
gcagaccaaacaagaaaagagctcttgacaggagttgttgacgaagaaggggacattaca
tactaccacccatgtaaatccgaacctaagggaaatgtaaacgtaaagtgggaaggcgga
cccgctgtagcctcgttaatggaagaccgcgttctggtatttgatcagaagtccgtagaa
aagctgcaggatcacggatactatgggaaacaaacaggcgccgttcttcaattgtcattg
attgaagctgctcatcttatggaaaaaggatggctggaagtcatcaggattgcttccaac
aggcggataaatacagaccgttttaagaagagagctttgaaatttcagccggattttgat
cttaggcttgcagtatacaacgatctccggtctagatcattaatagtaaaaaccggattc
aaatatgggtcgcattttagagtgtatgacgatgacccagacaaaactcacgccagatgg
ctggttcattcaataccgaatgactatgaaacgatctggccagaaatatcaagggcagtt
agacttgcacatggcgtgaaaaaagagattttatttgccagagtctcttctgaaaaaata
gagtatataaagctgactagagtcagaccctaa
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