Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1: MMINT_19620
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Entry
MMINT_19620 CDS
T02692
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
mer
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
Pathway
mer03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MMINT_19620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mer03021
]
MMINT_19620
Enzymes [BR:
mer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MMINT_19620
Transcription machinery [BR:
mer03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MMINT_19620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
AGN27232
UniProt:
R9T8I7
LinkDB
All DBs
Position
complement(1923120..1926719)
Genome browser
AA seq
1199 aa
AA seq
DB search
MRDLVELYFKDRSIVNHHISSFNDFLSTLDNPNSRMQKIVDNLRVSADDMDRGLIRLDPE
RTEGRIIEIRVGRKRDEKTGLIDSQSRPTMHVQLPIVREANGATHPLTPMESRLRNLNYL
APIYLDFTIIEDGIEKEPETVHIGDLPVMLRSKRCNLYKENIEVDKELTDEEYKLKLMEA
GEDPSDPGGYFLIGGTERVLISLEDLAPNRVMVEYNERYGTQLEVAKVFSQREGYRALTL
VEKKKDGILTVTVPAATGQIPLVALMKALGMENDKDIYDAIVSVPEMANIVYANIEECHD
KKLYPPNGIYTTEDAITYLERKFATGQAKEYREKKVESIIDRSLLPHLGDTKEDRLKKAH
FLGRIARSVLELSIGMRKEDDKDHYANKRLKLSGDLMEDLFRVAFTNLMKDLKYQMERNF
SRKKENLRIGSSIRPDLMTHRLLHALATGNWVGGRAGVSQLLDRTSNMSTLSHLRRVTSS
LTRSQPHFEARDLHPTQWGRLCPNETPEGQNCGLVKNASLIIDVSEGFREEDVHWLLRDR
GVTEVRSGELRTGAKVYVNGDLVGNTENPKGLVADIRAGRRQGLLSSDINIRFDEEMGEV
IINCDEGRLRRPLLVVSDGKLSLTRRHIEEIRDDHLKWTDLIREGVIEWIDAEEEEDAYI
AVVPYNPPERCSECGRALSPTDLDWMNPGTNDSHAILKCKYCHGDNSAPILLNSEHTHME
IDPMIILGVAASVVPYPEHDSSPRVTMGSGMAKQSLGLSCTNYRKRPDTRGHLLHYPQKP
MVQTKPMDFIAFNDRPAGQNFVVAILSYNGYNIQDALILNKASVDRGLGRSTFMRTYRAE
ERRYPGGQEDHFEIPDPDVRGARADLAYATLGEDGLICPETEVSGGDVLVGKTSPPRFLE
EETDFLTPQKRRETSVTIRSGERGWVDSVMLTESENGSRLVKVKVRDERIPELGDKFASR
HGQKGVVGLLVPQEDMPFTCDGVTPDLVINPHAIPSRMTIAHVLEMIGGKVGSMEARAID
ATAFSGEKEQALREELVRNGFKHTGKEVMYDGVTGKMFEANMFTGVIYYQKLHHMVSGKM
HVRSRGPVQILTRQPTEGRSRQGGLRFGEMERDCLIGHGAAMVIKDRLLDESDGTALYIC
GNPNCGHISMMDRRGVVRCPVCNNNTNVHLVQTSYAFKLLLDELLSLGVVMRLQLEDLR
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgatttagtagaactctattttaaagacagaagtattgttaaccaccatatatcg
agctttaatgattttctctccactcttgacaacccgaacagcagaatgcagaagattgtg
gataatctgagagtatccgcggatgatatggaccgcggactgatacgtcttgatcctgag
agaactgaaggacgtatcatcgaaataagagtaggacgcaagagggatgaaaaaaccggt
ctcatcgactctcagtcaagacctacaatgcatgtgcagctgccgattgtaagagaagcg
aacggtgccacacatcctttgactcctatggaatccagactcagaaacctcaactacctt
gctccgatttatcttgattttacaattattgaagacggtattgaaaaagaaccggagacc
gtccacatcggcgatctgcctgtaatgctccgctcaaagcgctgcaatctctataaagag
aacatcgaagtcgacaaagagcttacagacgaagaatacaaactaaagctcatggaggct
ggtgaagatccatcagatccaggcggatatttccttatcggcggaacagagagagttctg
atttcgttggaagacttagctcctaaccgtgtaatggtggagtataatgaaagatacgga
acccagctggaagttgctaaagtattctcgcagagggaaggataccgtgctcttactctt
gttgaaaagaagaaagacggaattctgacagtcacagttccggcagctacaggacagata
ccgctggtagctttgatgaaagctttgggaatggagaatgataaggatatctacgatgca
atagtctctgttccagagatggcaaatattgtttatgcaaacattgaagaatgccatgac
aaaaaactctaccctccaaacggtatctacaccaccgaagatgccatcacctacttggaa
cgtaaatttgctacaggacaggcaaaagaatacagagaaaagaaagtagaatcaattatc
gatcgttcactgcttcctcatctcggagataccaaagaagacagacttaagaaagctcac
ttccttggcagaattgctcgttcagttcttgaattaagcatcggcatgagaaaggaagac
gacaaagaccactatgccaacaagcgtctgaagctttccggagatcttatggaagatctg
ttcagagttgcatttacaaacttgatgaaggatcttaagtatcagatggaacgcaatttc
tcacgtaaaaaagagaatctgcgcattggttcatcaatccgtccggatcttatgactcat
cgtctcctgcatgctttagccacaggaaactgggtaggcggaagagctggtgtatctcag
cttttagaccgtacttctaacatgagtactttgtctcacctcagaagagtcacatcttca
cttacacgttcacagcctcacttcgaagcccgtgatcttcaccctactcaatggggaaga
ctatgccccaatgaaactcctgaaggtcagaactgcggtctggtgaagaacgcatcattg
atcattgatgtatcagaaggattcagagaagaagacgtacattggcttctgcgcgaccgc
ggagttactgaagtcagaagcggcgaacttcgtactggtgcaaaagtatacgtcaacggg
gatctggtaggaaatacagagaaccccaagggactggttgcagacataagagctggaaga
cgccagggtctgttatccagtgatatcaacatccgtttcgatgaagaaatgggtgaagta
atcatcaactgtgatgaaggacgtctcagacgtccgctgctggtagtaagtgatggcaaa
ctgtctcttacccgcaggcatattgaagagatcagggacgaccacctgaaatggacagac
cttatcagagaaggagtaatcgaatggatcgatgcagaagaggaagaggacgcttacatc
gctgtagttccttacaatcctccagaacgctgcagtgagtgcggcagagctctttcacca
actgatctggactggatgaatcccggcacaaatgattctcatgccattctcaaatgcaaa
tactgccacggtgacaattctgctccgatactgctcaacagtgaacatacccatatggaa
atagatccaatgatcatccttggtgtagccgcaagcgttgttccctatcctgaacacgac
tcttctccaagagttactatgggatccggtatggcaaagcagtctcttggtttgagctgt
accaactatcgtaagcgtccagatacccgcgggcatcttctgcactatccgcagaagccg
atggtccagacaaaaccgatggatttcatcgcattcaatgaccgtccggctggacaaaac
ttcgttgtggcaattttgtcttacaacggttacaatattcaggatgctttaatcctaaac
aaggcgtctgtcgacagaggtctgggacgttcaacctttatgaggacataccgtgcagaa
gagcgcagatatcctggaggacaggaagatcactttgagattcctgatccagacgtgcgc
ggtgcccgtgcagatctggcatatgcaactctcggtgaagatggtcttatctgccctgag
acagaagtcagcggcggtgatgtattagttggaaaaacttctcctccgcgtttccttgaa
gaggaaacagacttcctgactcctcagaaaaggagagaaacatcagtcactatccgttca
ggagagaggggctgggtcgactctgtaatgcttactgagtctgagaatggttccaggctt
gtaaaagtgaaagtgagggatgaaagaattcctgaactgggagataaattcgcttccaga
catggacagaaaggagttgtaggacttcttgttcctcaggaagacatgcctttcacatgc
gatggtgtgacgcctgatttagtcatcaacccgcacgctattccatctcgtatgactatc
gcccacgttctggaaatgatcggaggcaaggtcggttcaatggaagcaagagctattgac
gcaacagcgttctctggagaaaaggaacaggctctcagagaagaactagtgcgcaatgga
ttcaagcacactggtaaagaagtgatgtatgacggtgttaccggaaaaatgtttgaagct
aacatgttcacaggtgtgatttactatcagaaactgcaccacatggtgtctggaaaaatg
catgtccgttcccgcggacctgtgcagatacttacaaggcagcctactgaaggaagatca
cgtcagggcggtctgagattcggtgaaatggaaagagactgtcttatcggacacggtgca
gcaatggttatcaaagatcgtcttctggatgaatccgatggtactgctttgtatatctgc
ggaaatcctaactgcggacacatctctatgatggaccgcagaggtgtagtacgctgccct
gtgtgcaacaataataccaacgtacatcttgttcagacgagctatgctttcaaactcctg
ttggatgagctgctgtcgcttggtgtcgtcatgagacttcaactggaggatttaagatga
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