Mesorhizobium erdmanii: EB233_01155
Help
Entry
EB233_01155 CDS
T06791
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
merd
Mesorhizobium erdmanii
Brite
KEGG Orthology (KO) [BR:
merd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
merd03019
]
EB233_01155 (hrpB)
Enzymes [BR:
merd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EB233_01155 (hrpB)
Messenger RNA biogenesis [BR:
merd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EB233_01155 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
ResIII
AAA_30
HA2_N
AAA_25
AAA_19
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QKC74306
UniProt:
A0A6M7UC45
LinkDB
All DBs
Position
complement(246200..248659)
Genome browser
AA seq
819 aa
AA seq
DB search
MTTKPLPELPVSAVLPALSQALGSGNSAVLVAPPGAGKTTLVPLALLEAPWLGAGKIVLL
EPRRLAARAAARRMAQLLDEEPGATVGYAMRMENRTSAKTRILVVTEGVLARMILDDPEL
PGVSAVIFDEFHERSLDGDFGLALALDVQGALRPDLRLLVMSATLDGARVAKLLSGAPVI
ESEGRAFPVDIRYEERPAGIPIEDAMAKAIRGALADESGSVLAFLPGQREIERTAERLAG
KVGTDTGIVPLYGQLDGKAQDAAIKPPPPGRRKVVLATSIAETSITIDGVRVVIDSGLSR
LPRYEPASGLTRLETVRVSKASADQRAGRAGRTQAGVAIRLWRAEQTSALPAFTPPEILE
ADLSGLLLDCAAFGVADPAGLAFLDPPPAPALNEARVLLRALHAIDETGRLTEAGASMRK
LALPVRLAHMVAEAAKNGHALEAAMLAVLLTERGLGGDGADLERRLMRFRGEKSPRAAAA
RQLAERLARQVGGAKNSETASVGSLLIHAWPDRVAKARGERGRFVLANGSGAMLDAADPL
AGEPFLVVADLQGKAQNARIAAAAAIGEDDIRATLADRIETRRQTSFDRERRAVRVRETV
RLGAITLAERMLPAPSGADADRAILDALREHGLSLLSWSKEAEALRQRLSWLHRGLGSPW
PDMSDEALVEHLDDWLLPFLSGAASFAAIGPGVISAGLASLVPHDQQRRIETLAPTHFDA
PSGSHVPIRYDGEWPVLAVRVQELFGLDRHPSIANGTVPLTLELLSPAHRPIQTTRDLPG
FWRGSWADVRADMRGRYPKHVWPENPLLATATARAKPRA
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaaacccttgccggagcttccggtatccgccgtgctgccggcgctgagccaa
gcgcttggctccggcaacagcgcggtgctggtggcacctcccggcgccggcaagaccacg
ctggtgccgctggcattgctcgaagcgccctggctgggggccggaaagatcgtcctgctc
gagccgcgccggctcgccgcccgtgccgccgcgcgccgcatggcgcaattgctggatgag
gagccgggcgccactgtcggctacgccatgcgcatggaaaaccgcacttcggcaaagacc
cggatattggtcgtcaccgagggcgtgttggcccgcatgatcctcgacgaccccgaattg
cccggcgtctcggcagtgatcttcgatgaattccacgagcgttcgctcgatggcgatttc
ggtctcgctttggcgctcgacgtgcaaggcgcgctgcgtccggacctgcgactgctggtg
atgtcggcgacactcgatggcgcgcgcgtcgcgaagctcctgtccggcgcaccagtgatc
gaaagcgaaggccgcgccttccccgtcgacatccgttatgaggaacggccggctggtatc
ccgatcgaggatgccatggccaaggcgatccgcggtgcccttgccgacgagagcggcagc
gtgcttgccttcctgcccggccagcgcgagatcgagcgtaccgccgagcggctggccggc
aaggtcggcaccgacaccggcatcgtcccgctctatggccagctcgacggcaaggcgcag
gacgccgcgatcaagccgccgccgccgggccgccgcaaggtggtgctggcgacctcgatc
gccgagacctccatcaccatcgacggcgtccgcgtcgtcatcgattccggcctgtcgcgc
ctgccgcgctatgagccggccagcggcctcacccggttggaaaccgtgcgcgtcagcaag
gcttcggcagaccagcgcgccggccgtgccgggcgcacgcaagccggcgtcgccatccgg
ctgtggcgcgccgagcagacatcggcacttcccgccttcacgccgccggaaatcctcgaa
gcggacctttccggcctgctgctcgactgcgccgccttcggtgtcgccgacccggcgggt
ctcgccttcctcgacccgccgccggccccggcgctcaacgaggcaagggtgctgctgcgc
gcgctccatgccatcgacgagactgggcgtttgacggaagctggcgcttcgatgcgcaag
ctcgctctgcccgtgcggctggcgcatatggtcgccgaggctgctaagaacggccatgct
ctcgaggcggccatgctcgccgtgctgctcaccgaacgcggtcttggcggcgatggcgcc
gatctcgaacggcggctgatgcgctttcgcggcgaaaaatcacctcgcgccgccgccgcg
cggcaactggctgaacggctggcgcggcaggtgggcggggcgaagaacagcgaaacagct
tccgtgggttccttgctgatccacgcctggccggatcgcgtcgccaaggcgcgtggcgag
cgtggccgcttcgtgctggccaatggctccggcgccatgcttgatgccgccgacccgctg
gcgggcgaaccgtttctggtcgtcgccgacctgcagggcaaggcccagaatgcccgcatc
gcggcggcggcggcaatcggcgaggacgacatccgcgccacgctggccgaccggatcgaa
acgcgccggcaaaccagtttcgaccgcgagcggcgcgccgtgcgcgtgcgcgaaaccgtg
cgtctcggcgccatcacgctcgccgagcgcatgctgccggcgccgtcaggcgccgatgcc
gatagggcgatcctggacgccttgcgcgagcacggcctgtcgctgttgagctggagcaag
gaggccgaggcgctgcgccagcggctgtcctggctgcatcgcggcctcgggtcgccatgg
cccgacatgtcggatgaagcgctggttgagcaccttgacgactggctgctgcccttcctg
tcgggggccgcatccttcgccgcaatcggtccgggcgtcatttcggctggcctggcctcg
ctcgtgccgcatgaccagcagcgccggatcgagacgttggcgccgacccatttcgacgct
ccgtccggcagccacgtgccgatccgctatgacggcgaatggcccgtgcttgcggttcgc
gtgcaggagctgttcggcctcgaccgccacccctcgattgccaatggcaccgtgccgctg
acgctcgaactgttgtcgccggcgcaccggccgatccagaccacgcgcgacctgcccggc
ttctggcgcggctcctgggccgacgtgcgggccgacatgcgcggccgctatcccaagcat
gtctggccggagaacccgctgcttgccacggctaccgcccgcgcgaagccgcgagcatga
DBGET
integrated database retrieval system
