KEGG   Mesorhizobium erdmanii: EB233_04390
Entry
EB233_04390       CDS       T06791                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
merd  Mesorhizobium erdmanii
Pathway
merd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:merd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EB233_04390 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:merd03021]
    EB233_04390 (rho)
   03019 Messenger RNA biogenesis [BR:merd03019]
    EB233_04390 (rho)
Transcription machinery [BR:merd03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     EB233_04390 (rho)
Messenger RNA biogenesis [BR:merd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     EB233_04390 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT S1CSD-TOTE-2 AAA_25 AAA_22 DnaB_C
Other DBs
NCBI-ProteinID: QKC74874
UniProt: A0A6M7UCD4
LinkDB
Position
919391..920656
AA seq 421 aa
MQEMKLTEFKNKKPPELIAYAESLEVENASVMRKQELMFAILKKLAAQDIEIIGDGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRSPKEGERYFALLKVN
TINFDDPEKIRHKIHFDNLTPLYPTSRLKMEVDSPTTKDISSRVIDLVAPIGKGQRALIN
AQPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNCEIQLDRKVADKRIYPA
IDILKSGTRKEDLLVPRADLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNGDFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaagaaatgaaacttaccgaattcaagaacaagaagccgccagagctgatcgcttat
gccgaatcgctcgaggtggagaacgccagcgtcatgcgcaagcaggagctgatgttcgcg
atcctgaagaagctggccgcccaggacatcgagatcatcggcgacggcgtggtcgaagtg
ctccaggacggtttcggcttcctgcgctcggccaatgccaactatctgccaggtcccgat
gacatctatatctcgccgtcgcagatccggcgcttttcgctgaagaccggcgatacggtc
gaagggccgatccgcagcccgaaagagggcgagcgctatttcgcactgctcaaggtcaac
accatcaatttcgacgatcccgaaaagatccgccacaagatccatttcgacaatctgacg
ccgctctatccgacctcgcggctgaagatggaggtcgacagcccgacgaccaaggacata
tcgtcccgcgtcatcgacctggtggcgccgatcggcaagggccagcgcgcgctgatcaac
gcgcagccgcgcaccggtaagacggttctgctgcagaacatcgcacactcgatcaccgcc
aatcaccccgaatgctatctgatcgtgcttttgatcgacgagcggcccgaggaagtgacc
gacatgcagcgctcggtgaagggcgaggtgatctcctcgaccttcgacgagccggcggtg
cgccacgtgcaggtcgccgaaatggtcatcgaaaaggccaagcgcctggtcgagcatggc
cgcgacgtcgtcatcctgctcgattccatcacccgcctcggccgcgcctacaacaccgtg
gtgccgtcatccggcaaggtgttgaccggcggtgtcgacgccaacgcgctgcagcggccg
aagcgcttcttcggcgccgcccgcaacatcgaggaaggcggttcgctgaccatcatcgcc
accgcgctgatcgacaccggcagccgcatggacgaagtcatcttcgaagagttcaagggc
accggcaactgcgaaatccagctcgaccgcaaggtcgccgacaagcgcatctatccggcc
atcgacatcttgaagtccggcacccgcaaggaagacctgctcgtgccccgcgcggacctg
cagaagatcttcgtgctgcgccgcatcctggcgccgatgggaaccaccgacgcgatcgag
ttcctgatcgacaagctgaagcagaccaagaccaacggcgatttcttcgattcgatgaat
acgtag

DBGET integrated database retrieval system