Mesorhizobium erdmanii: EB233_06090
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Entry
EB233_06090 CDS
T06791
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
merd
Mesorhizobium erdmanii
Pathway
merd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
merd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EB233_06090 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
merd03019
]
EB233_06090 (recQ)
03400 DNA repair and recombination proteins [BR:
merd03400
]
EB233_06090 (recQ)
Enzymes [BR:
merd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EB233_06090 (recQ)
Messenger RNA biogenesis [BR:
merd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EB233_06090 (recQ)
DNA repair and recombination proteins [BR:
merd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EB233_06090 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QKC75166
UniProt:
A0A6M7UEJ1
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All DBs
Position
1258275..1260119
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AA seq
614 aa
AA seq
DB search
MSAQAAGIRAEDPKRRVLKDVFGFDDFRPGQADIMEALLSGRHVLAVMPTGAGKSLCYQV
PALVMGGLTLVVSPLVALMQDQVAALRLAGVGADTINSSLDREANVAAWRRVASGQKRLL
YLAPERLMTERMLEALSRLDVSLIAIDEAHCISQWGPAFRPEYEDLSRLRHIFPNVPIIA
VTATADESTRSDIEARLFAERVETLVLGFDRPNIKLAIESKQDSKRQLLRFIERHPGKSG
IVYCLSRKKTEEMATFLEKHGVTALAYHAGMSKDAREANQNAFMTLSGVVMVATIAFGMG
IDKPDVAYVFHTDMPGSLEAYYQEIGRAGRDGRKAEAHMLYGLGDIRMRRLFIDDEDASV
EHKRRAHRRLDTLIGYCETAQCRRQVLLGYFGEQAEPCGNCDNCVDQVPRADGAAEARII
LTAVAQSGQRFGAAHVIDILTGHETEKVQARGHHRLTSFGSGAGHKKTVWLSLIRQLVAG
GFLMPDPDGHGGLAISDSGGALARGEVAFQYRVENRDPLARGRKRAAQGSGMGGEGVDAS
LLATLKSLRLRLAKERQVPAYVVFSDRTLIDMAERRPRDLDAFAEVNGVGGAKLKEFGEI
FVKAIAGHGSDRSV
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcacaggcggcgggtattcgggccgaggaccccaagcggcgcgtcctcaaggac
gtgttcggtttcgacgatttccgccccggccaggccgacatcatggaggcgctgctcagc
gggcgccatgtgctggccgtgatgccgacgggtgcgggcaaatcgctctgctaccaggtg
ccggcgctggtcatgggcggcctcaccctcgtcgtgtccccgctggtggcgctgatgcag
gaccaggtcgccgccttgcggctggccggcgtcggcgccgatacgatcaattcctcgctg
gaccgcgaagccaatgtcgccgcctggcgccgtgtcgcctccggccagaagcggctgctc
tatctggcgccggagcggctgatgaccgagcgcatgctcgaagcgctttcgaggctcgac
gtcagcctgatcgccatcgacgaggcgcattgcatctcgcaatggggaccggccttccgg
cccgaatatgaggacctgtcgcggttgcggcacatctttcccaacgtgccgatcatcgcg
gtgacggcgacggccgacgagagcacgcgcagcgatatcgaggcacggctgttcgccgag
cgggtcgagaccctggtgcttggtttcgaccggcccaacatcaagctggcgatcgaatcc
aagcaggacagcaagcggcaattgctgcggttcatcgagcgtcacccaggcaagagcggc
atcgtctactgcctgtcgcgcaagaagacggaagagatggcgacctttctcgagaagcac
ggcgtcaccgcgctcgcctatcatgccggcatgagcaaggacgcgcgcgaggccaatcag
aacgccttcatgacgctgtcgggcgtcgtcatggtggcgaccatcgctttcggcatgggt
atcgacaagcccgacgtcgcctatgtcttccacaccgacatgcccggcagcctggaggcc
tattaccaggagatcggccgcgccggccgtgacgggcgcaaggccgaggcgcacatgctc
tacgggcttggcgatatccgcatgcgcaggctgttcatcgatgacgaggacgcatcggtg
gagcacaagaggcgcgcccatcgccggctcgatacgctgatcggctattgcgagacggcg
cagtgccggcgccaggtgctgctcggctatttcggcgagcaagccgagccttgcggcaat
tgcgacaattgcgtcgaccaggtgccacgcgccgatggcgctgccgaggcgcgcatcatc
ctgacagcggtcgcgcagagcggccagcgtttcggcgccgcccatgtcatcgatatcctg
accggccatgagaccgagaaggtgcaagccaggggccatcacaggctcaccagcttcggc
agcggagcggggcacaagaagacggtgtggctgtcgctgatccggcaactggtcgccggc
ggcttcctgatgccggatcccgatggccatggcggcctcgccatttcggacagcggcggc
gcgctcgcccgtggcgaggttgcgttccagtaccgcgtcgagaaccgggatccactcgcg
cgcgggcggaagcgtgccgcgcaaggctctggcatgggcggcgaaggcgtcgatgcctcg
ctgctggccacgctcaaatcgctgcgactgcgtctggccaaggagcgtcaggtgccggcc
tatgtggtgttctccgaccgcacgctgatcgacatggccgagcgccgtccgcgcgatctc
gacgccttcgccgaggtgaatggtgtgggaggggcgaagctcaaggaattcggggagatt
tttgtcaaggcaattgccggacacgggtccgacaggtcggtctga
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