Mesorhizobium erdmanii: EB233_16250
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Entry
EB233_16250 CDS
T06791
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
merd
Mesorhizobium erdmanii
Pathway
merd03420
Nucleotide excision repair
merd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
merd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EB233_16250
03430 Mismatch repair
EB233_16250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
merd03400
]
EB233_16250
Enzymes [BR:
merd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EB233_16250
DNA repair and recombination proteins [BR:
merd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EB233_16250
MMR (mismatch excision repair)
Other MMR factors
EB233_16250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QKC76873
UniProt:
A0A6M7UL06
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All DBs
Position
complement(3292765..3295428)
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AA seq
887 aa
AA seq
DB search
MSGFSEDMPFFDEPNARLTAPSGIAARAMAARGGNNGAPDYLKGLNPEQRLAVETTEGPV
LVLAGAGTGKTRVLTTRIAHILATGKAFPSQILAVTFTNKAAREMKQRIGILIGEGNVEG
MPWLGTFHSIGVKLLRRHAELAGLRSDFTILDTDDVVRLIKQLIQAEGLDDKRWPAKQFA
QMIDGWKNKGQGPADIAEGDARSFANGKGRELYKAYQERLRTLNACDFGDLLCHPIRIFR
ANPDVLKDYHRRFKYILVDEYQDTNTAQYMWLRLLAQRPDSGRNNSTSTDVRTAEGRKPD
RAPEPLRGPRGGPAPAGAEQPVSENKVNICCVGDDDQSIYGWRGAEVDNILRFDKDFPGA
TIIRLERNYRSTAHILGAASHLIAHNEGRFGKTLFTDRNDPEDGKVNVHAAWDSEEEARA
IGETIEAYQRQKHNLNDMAILVRASFQMRAFEDRFITLGLNYRVIGGPRFYERLEIRDAL
AFFRVVANGTDDLAFERIVNVPKRGLGEATIRQIHDTARALRIPMLEAAANLAESDELKP
KPRAALREVAANFERWQKALETKPHTELAETILEESGYTDMWKNDRSAEAPGRLENLKEL
IRSMEEYESLRSFLEHVALVMDAEQNAGQDAVSIMTLHSAKGLEFETVFLPGWEEGLFPH
QRALDEGGRSGLEEERRLAYVGLTRAKKNLHLWFVSNRLIHGLWQSTIPSRFLEELPESH
VEIAESGNSYGGYGNSYGGGSFASGRGGRQNPYGASRFDNVGAESEKSGAFSNTYSTPGW
QRAQANRTEATDRNWGTRSGHQVERIGYGETDSGYGAGRTSVKGRTIDGELVAKSVSDTP
SAFTVGDRVFHQKFGNGNISAIEGNKLTIDFDKAGQKRVLDGFVAAV
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcttttccgaagacatgccctttttcgacgaacccaatgcgcggctcacggcc
ccgtcgggcatcgccgcgcgcgccatggctgcccgcggcggcaataacggcgcgccggat
tatctgaaggggctcaaccccgagcagcggctggcggtggagaccaccgaaggcccggtt
ctggtactggccggcgccggcaccggcaagacccgtgtgctcaccacccgcatcgctcac
atcctcgccaccggcaaggccttcccctcgcagatcctggccgtaaccttcaccaacaag
gccgcgcgcgagatgaagcagcgcatcggtatcctgatcggcgaaggcaatgtcgaaggc
atgccctggctgggcaccttccactcgatcggtgtcaagctgctgcgccgtcatgccgag
cttgccggtttgagatccgacttcaccatcctcgacaccgacgacgtcgtgcggctgatc
aagcagttgatccaggccgaaggcctggacgacaagcgctggccggccaagcagttcgcg
cagatgatcgacggctggaagaacaagggccagggaccagccgacatcgccgagggcgac
gcccgcagtttcgccaacggcaagggccgcgagctctacaaagcctatcaggagcggctg
cggacgctgaacgcctgcgatttcggcgacctgctgtgccaccccatccgcatcttccgc
gccaatccggacgtgctgaaggactaccaccggcggttcaaatacatcctcgtcgacgaa
taccaggacaccaacaccgcccagtacatgtggctgcgcctgctcgcgcaacggccggat
tcaggacgtaacaactcgacgtcgacagatgtgcgcacggccgaaggccgcaagcccgac
cgggcgcccgaacccttgcgaggcccgcgcggagggcccgcgccggcaggcgcggaacag
cccgtgagcgaaaacaaggtcaacatttgctgcgtcggcgacgacgaccagtcgatctat
ggctggcgcggcgccgaggtcgacaacatcctgcgcttcgacaaggattttcccggcgcc
accatcatccggctggagcgcaactaccgttccaccgcgcacatactgggcgccgcctcc
cacctcatcgcccacaatgagggccgtttcggcaagacgctgttcaccgaccgcaacgac
cccgaggatggcaaggtcaatgtccacgccgcctgggattccgaggaggaagcccgagcc
atcggcgagaccatcgaggcgtatcagcgccagaagcataatctcaacgacatggcgatc
ctcgtgcgtgcgtctttccagatgcgcgccttcgaggatcgcttcatcacgctcggcctc
aactaccgcgtcatcggcggcccgcgtttctacgagcgcttggaaattcgcgacgcgctg
gcctttttccgcgtcgtcgccaacggcaccgacgaccttgccttcgagcgtatcgtcaat
gtgccgaagcgcggcctgggcgaagccaccatccgccagatccacgacaccgcgcgcgcc
ctgcgcatcccgatgctggaggctgccgccaacctcgccgaaagcgatgaactgaagccg
aagccgcgcgccgcgctgcgcgaagtggctgccaatttcgaacgttggcaaaaggcgctg
gaaaccaagccgcacaccgagcttgccgagaccattctcgaggagagcggctacaccgac
atgtggaagaacgaccgttcggccgaggcgccgggacggctggagaacctcaaggaactg
atccgctcgatggaggagtacgaatcgctgcgctccttcctcgaacatgtggcgctggtc
atggacgccgagcagaatgccggacaggacgccgtctcgatcatgacgctgcattcggcg
aaaggcctcgaattcgaaaccgtcttcctgcccggctgggaggaaggcctgttcccgcat
cagcgcgcgctcgatgaaggcggccgctccgggctggaggaagagcgccggctggcctat
gtcggcctgacccgcgccaagaagaacctgcatctgtggttcgtctccaaccgcctcatc
cacggcctctggcagtcgaccatcccgtcgcgcttccttgaggaactgccggaatcgcat
gtcgagatcgccgaaagcggcaattcctatggcggctacggcaattcctatggcggcggc
tccttcgcctccggtcgtggcgggcggcagaacccgtatggcgcctcgcgcttcgacaat
gtcggtgctgaaagcgaaaaatccggcgccttctccaacacctattcgacgccgggctgg
cagcgcgcgcaggccaaccgcaccgaagcgaccgatcgaaactggggcacgcgctccggc
caccaggtcgagcgcatcggctatggcgagaccgactccggatacggcgccggccgcacg
agcgtgaaaggccgcaccatcgacggcgaactggtcgccaaatccgtctccgacacgcct
tcggccttcactgtcggcgaccgcgtcttccaccagaaattcggcaacggcaacatttcg
gccatcgaaggcaacaagctgaccatcgacttcgacaaagccggccagaagcgtgtgctg
gacgggtttgtcgcggcagtgtga
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