Mesorhizobium erdmanii: EB233_18260
Help
Entry
EB233_18260 CDS
T06791
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
merd
Mesorhizobium erdmanii
Pathway
merd03410
Base excision repair
merd03430
Mismatch repair
merd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
merd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EB233_18260 (recJ)
03430 Mismatch repair
EB233_18260 (recJ)
03440 Homologous recombination
EB233_18260 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
merd03400
]
EB233_18260 (recJ)
DNA repair and recombination proteins [BR:
merd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EB233_18260 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EB233_18260 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EB233_18260 (recJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
SOGA1-2-like_CC
Motif
Other DBs
NCBI-ProteinID:
QKC79929
UniProt:
A0A6M7UPF1
LinkDB
All DBs
Position
3701083..3702864
Genome browser
AA seq
593 aa
AA seq
DB search
MMGDRRLFLDVRQSATGLSWEHRLTERQDMTALAIAQGHGVPDIVARVLAGRGVTADETE
RFLDPTIRDLLPNPASLTDMDKAAARIAAAVMAREKVAIFGDYDVDGAASSALLKRFLAH
FSVPSEIYIPDRIFEGYGPNPDAMRELVSRGATLIVTVDCGTNSAVSVDAANEAGADVVV
LDHHQVGGALPAAIAVVNPNRDDDLSGQGHLCAAGVVFLALVQAAKILRGLSDFAPPDLL
SLLDLAALATVCDVVPLTGVNRAFVVKGLQMARQQKNEGLAALARVSRIGEPISTFHLAY
LIGPRINAGGRIGDAALGSRLLATDDPVEARTIAETLDRLNQERQQMEQEMLAQARAEAD
AELAGGNGPAIIVTASNSWHPGIVGLLASRLKDHARRPAFAIAFNAVGIGTGSGRSVSGF
DLGRLVREAAAAGLIVKGGGHGMAAGITVERAKLGELRAFFEERAAADVFRLQDEESLAI
DGALAAEGATLNLLDALEKAGPFGAGHVPPVFVLPRHRLADARPVGTNHIRCELQSDSGG
RIQAIAFRAVDTVLGEFLFKNRGKTVHVAGSLSGNYWNGNRTVQFRIVDAARA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcgacaggcgcctcttcctcgatgtcaggcaatcggcgaccggtctctcgtgg
gagcaccggctgaccgaacggcaggacatgacggcgcttgccatcgcgcagggccatggc
gtgcccgacatcgtcgcgcgcgttctggccggacgcggcgtcaccgccgatgagaccgag
cgcttccttgatccgacgatccgtgacctgttgcccaatcctgcgtcactgaccgacatg
gacaaggccgccgcccgcatcgcggccgcggtgatggccagggaaaaggtagcgatcttt
ggcgactatgatgtcgacggcgccgcctcgtccgccttgctgaagcggttcctggcgcat
ttctcggtgccgtcggaaatctatatcccggatcgcattttcgagggctacggccccaat
cccgatgccatgcgcgaactcgtgtcgcgcggcgcgacgctgatcgtcaccgtcgactgc
ggcaccaacagcgccgtttccgtcgatgcggccaatgaagccggcgccgatgtcgtggtg
ctcgaccaccaccaggtcggcggagccttgccggcggcgattgccgtcgtcaatccaaac
cgcgacgacgatctttccgggcagggccatctgtgtgccgccggcgtggtcttcctcgct
ctggtgcaggccgcaaaaatcctgcgtggcctcagcgattttgcgccgcccgacctgctt
tcgctgctcgatctcgctgcattggctaccgtttgcgacgtggtgccgctcaccggcgtc
aatcgtgccttcgtcgtcaaagggctgcaaatggcgcgccagcagaagaatgaagggctg
gccgcgttggcgcgggtttctcgcatcggcgagccgatcagcacctttcatctcgcctat
ctgatcggtccgcgcatcaatgccggcgggcgtatcggcgatgcggcgcttggcagccgg
ctgcttgcaacggacgatccggtcgaggctcggaccatcgccgagacgctcgaccggctg
aaccaggaacggcaacagatggagcaggagatgctggcccaggcgcgcgccgaagccgat
gcggagcttgccggtggcaacggaccggcgatcatcgtcaccgccagcaacagctggcac
cccggcatcgtcggcctgctcgcctcgaggctcaaggatcacgcgcggcggccggctttc
gccatcgccttcaatgccgtgggaatcggtaccggttcgggccgttcggtgtcgggcttc
gatctcggccgtttggtgcgcgaggccgccgctgccggactgatcgtcaagggcggcggc
catggcatggcggccggcataaccgtggagcgcgccaagctcggcgaactcagggcgttc
ttcgaggaacgggcggccgctgacgttttccggctgcaggacgaggaaagcctggcgatc
gacggtgcgctcgctgccgagggcgcaacgctcaacctgctcgacgccttggaaaaggct
ggcccattcggcgccggccatgtccctccggttttcgtgctgccgcgtcatcggctggcc
gacgcacggccggtcggcacaaaccatatacgctgcgaattgcagtcggacagcggtggc
cgcatccaggcgatcgcctttcgcgccgtcgatacggtgcttggcgagttcctgttcaag
aaccgaggcaagaccgtgcatgtggcaggctcgttgtcgggcaattactggaacggcaac
cgcactgtgcagttccgcattgtcgatgcggcgcgcgcgtga
DBGET
integrated database retrieval system
