Mesorhizobium erdmanii: EB233_18470
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Entry
EB233_18470 CDS
T06791
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
merd
Mesorhizobium erdmanii
Pathway
merd03030
DNA replication
merd03430
Mismatch repair
merd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
merd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EB233_18470
03430 Mismatch repair
EB233_18470
03440 Homologous recombination
EB233_18470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
merd03032
]
EB233_18470
03400 DNA repair and recombination proteins [BR:
merd03400
]
EB233_18470
Enzymes [BR:
merd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EB233_18470
DNA replication proteins [BR:
merd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EB233_18470
DNA repair and recombination proteins [BR:
merd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EB233_18470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
McdB_C
DUF655
Motif
Other DBs
NCBI-ProteinID:
QKC77240
UniProt:
A0A6M7UMI3
LinkDB
All DBs
Position
3745525..3749052
Genome browser
AA seq
1175 aa
AA seq
DB search
MADDRLPRDPLKREAAIAAARPEVPARPFVHLRVHSAYSLLEGALQLGKIVGHAVKDEAP
AIAVTDTNNLFGALEFAQKAVKDGIQPIIGCQIALAFSGENSDGQRDRRRQGPEMRPVVL
IAATETGYSNLVRLVSGVYLETPPGEAVHLTTETLNGQTDGLICLSGGPRGPIGNALKED
RRDLAEARLLTLKALFGDRLYVELDRVAGYDRVVEHQTIDLAYAHELPLVATNEAFFSSR
DDYEAHDALIAIAEGSVVAVDTRRRLSPDNFLRSQADMAKLFADLPEAIDNTVEIALRCS
YYPKNRSPILPRFTGGDASDKDAAEKAEAAELARQAREGLDARLALHGPTPGYTVEQYRE
RLEFELGIIEKMKFPGYFLIVADFIKWAKAQGIPVGPGRGSGAGSLVAYSTTITDIDPLR
FSLLFERFLNPDRVSMPDFDIDFCQDRREEVIRYVQQKYGRDQVGQIITFGTLQARAVLR
DVGRVLQMPYGQVDKLSKMVPQNPANPVKLADAIANEPRFAEEAEKEPIVQTLLDMAQKL
EGLYRHASTHAAGIVIGDRPLSELVPMYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKT
LTVLETAVKLIRRRGIDIDLATIPLDDPDTYAMLSRGEVVGVFQVESAGMRKALIGMRPD
CIEDIIALVALYRPGPMENIPTYNARKHGEEEMASIHPKIDHLVKETQGVIVYQEQVMQI
AQELSGYSLGEADLLRRAMGKKIRAEMDKQRERFVTGAVERGVSKPQADFIFDLLAKFAD
YGFNKSHAAAYAVVSYQTAYLKAHYPVEFLAASMTLDMGNTDKLADFRQDALRLGIEVLA
PSVMTSFRPFEVGENRIYYSMAALKGVGDAAVEHIVAVRGEKPFKNLADFCERVDPKIVG
KRVFESLIMAGALDCFGHDRAQMMAGVERMMGLASLAQQNAVSGQADIFGASLGAQSQAL
NLPVTDPWLAADRLHREFQVVGFYLSAHPLDEYKAALQKMRVQNWGEFSAAVKRGASAGR
LAGTVTSKQERKTRTGNKMGVVAFSDTSGQYEAVLFSEALAQYRDLLEAGRSVVITVAAE
DRPEGVNLRINSVQSLEDEASRIQKALRIFVRNEGPASMIQAQLTQRGESQVSIIVIKEE
AQGEVEIALQGGFRVSPQIASAMRAVPGVVEVELV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacagacttccacgcgatcccctgaagcgcgaagccgcgatcgcggcggcg
cgtccggaggtgccggcgcggccgttcgtgcatctgcgcgtgcattcggcctattctctg
ctcgagggggccctccagctcggcaagatcgtcggccacgccgtgaaggacgaggcaccg
gccatcgccgtcaccgacaccaacaatctgttcggtgccttggagttcgcgcagaaggcg
gtcaaggacggcatccagcccatcatcggctgccagatcgcgctcgccttttccggtgaa
aacagcgacggccaacgcgaccgccggcggcaagggccggagatgcggccggtcgtgctg
atcgcggcaacagaaaccggctattccaacctggtccggctggtcagcggcgtctatctg
gaaacaccgccgggcgaggcggtgcacctgaccaccgagacgctgaatggacagaccgat
gggttgatctgcctcagcggcggaccacgcgggccgatcggcaacgccttgaaggaggat
cgccgcgatctggccgaggcgcggctattgacgctcaaagcactgttcggcgaccggctc
tatgtcgagttggaccgggtcgcgggctatgaccgggtcgtcgaacatcagacgatcgat
ctcgcctacgcgcacgaactgccgttggtcgccaccaatgaggcgtttttttcctcgcgc
gacgattacgaggcgcatgacgcgctgatcgccattgccgagggctccgtcgtcgccgtc
gacacccgccgccgattgtcgccggacaatttcctgcgcagccaggccgatatggcaaag
ctgttcgccgacctgccggaagcgatcgacaacaccgtcgagatcgctttacgctgctcc
tactatccaaagaaccgcagcccgatcctgccgcgtttcaccggcggcgatgcctccgac
aaggacgcggcggaaaaggccgaggccgccgaactcgcccgccaggcgcgcgaggggctc
gacgctcggcttgccctgcacggaccgacgccgggctatacggttgagcaatatcgcgag
cggctcgaattcgagctcggcatcatcgagaagatgaaatttccaggctacttcctgatc
gttgccgacttcatcaaatgggccaaggcacaaggcattccggtcgggccgggccgtggt
tcgggcgccggatcgcttgtcgcctattcgacgaccatcaccgatatcgatccgctgcgc
ttctcgctgctgttcgagcgcttcctcaatcccgaccgcgtgtcgatgcccgacttcgac
atcgacttctgccaggatcgccgtgaagaggtgatccgctacgtgcagcagaagtacggc
cgcgaccaggtcggccagatcatcaccttcggtacgctgcaggctcgcgccgtgctgcgc
gacgtgggccgcgttctgcagatgccctacggccaggtcgacaagctgtcgaagatggtg
ccgcagaacccggccaatccggtgaagctcgccgatgccatcgccaacgaaccgcgcttt
gccgaggaggccgagaaggagccgatcgtccagacgctgctcgacatggcgcagaagctg
gaaggcctttaccgccacgcctcgacgcacgccgccggcatcgtcatcggcgaccggccg
ctgtcggaattggtgccgatgtaccgcgatccgcgctcggacatgccggtcacccagttc
aacatgaaatatgtcgagcaggctgggctggtgaagttcgacttcctcggcctgaagacg
ctgacagtcctggagacggcggtgaagctgatccgccggcgaggcatcgacatcgatctg
gcaacgatcccgctcgacgatccagacacttacgccatgctgtcgcgcggcgaagtggtc
ggcgtgttccaggtggaaagtgccggcatgcgcaaggcgctgatcggcatgcggcccgac
tgcatcgaggacatcatcgcgctggtcgcgctctatcggccgggcccgatggagaacatc
ccgacctacaacgccagaaagcatggcgaggaggagatggcctcgatccatcccaagatc
gaccatctggtgaaggagacgcagggcgtcatcgtctaccaggaacaggtgatgcagatc
gcgcaggaactgtccggctattcgctcggcgaagccgaccttctgcgccgcgccatgggc
aagaagatccgcgccgaaatggacaagcagcgcgagcggttcgttaccggtgcggtggag
cgtggcgtcagcaagccgcaagccgacttcattttcgacctgctggccaagttcgccgac
tatggtttcaacaaatcgcacgccgcagcctacgccgtcgtctcctaccagaccgcctat
ctcaaggcgcattatccggtcgagttcctcgccgcctcgatgacgctcgacatgggcaac
accgacaagctcgccgacttccggcaggacgcgctacgccttggcatcgaggttctggcg
ccgtcggtgatgaccagttttcggccttttgaggtcggtgagaaccgcatctattattcg
atggccgcgctcaagggcgtcggcgacgcggcggtcgagcatatcgttgcggtacggggc
gaaaagccgttcaagaaccttgccgatttctgcgagcgggtcgatcccaagatcgtcggc
aagcgtgtcttcgaaagcctgatcatggctggcgcgctcgactgtttcggccacgaccgc
gcccagatgatggccggcgtcgaacggatgatggggctggcatcgctggcccagcagaac
gcggtttccggccaggccgacattttcggcgcctcgctcggcgcacagtcgcaggcgctc
aacctgccggtgacagatccttggctcgccgcggaccggctgcaccgcgaattccaggtc
gtcggcttctatctctctgcccatccgctcgacgaatacaaggcggccctgcagaagatg
cgcgtgcagaactggggcgaattctcggccgccgtcaaacgcggcgcttccgccggccgc
cttgccggcacggtgaccagcaagcaggagcgcaagacgcgcaccggcaacaagatgggc
gttgtggccttttccgacacgtccggccagtacgaggcggtgctgttttcggaagcattg
gcccagtaccgtgacctcctggaggccggccgctccgtcgtcatcacggtcgcggcggag
gacaggcccgagggcgtcaatttgcgcatcaattccgtgcaatcgctggaagacgaggca
agccgcatccagaaggcgttgcgcatcttcgtcaggaacgaggggcctgcctcgatgatc
caagcccagctcacccagcgcggcgaaagccaagtgagcattatcgtgatcaaggaagag
gcgcagggcgaggtcgagatcgccctgcagggtggcttccgcgtctcgccgcagatcgcc
tcggcgatgcgcgcagtgcccggcgtggtcgaagtggaattggtgtga
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