Mesorhizobium erdmanii: EB233_19900
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Entry
EB233_19900 CDS
T06791
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
merd
Mesorhizobium erdmanii
Brite
KEGG Orthology (KO) [BR:
merd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
merd03009
]
EB233_19900 (rimO)
Enzymes [BR:
merd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EB233_19900 (rimO)
Ribosome biogenesis [BR:
merd03009
]
Prokaryotic type
ribosomal protein modification factors
EB233_19900 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QKC77485
UniProt:
A0A6M7UK35
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All DBs
Position
complement(4042994..4044307)
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AA seq
437 aa
AA seq
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MSAPRVSFVSLGCPKALVDSERIITRLRAEGYEIARKHDGADLVVVNTCGFLDSARDESL
NAIGSALSENGRVIVTGCLGAEPEVIREKHPNVLAITGPQAYESVMAAVHEAAPPSHDPY
IDLLPPQGVKLTPRHYAYLKISEGCNNRCTFCIIPALRGDLVSRPAADVLREAEKLAKAG
VKELLVISQDTSAYGIDIKYQTSMFGDREVRAKFLDLSEELGKLGIWVRMHYVYPYPHVA
DVIPLMAEGKILPYLDIPFQHASPQVLKNMRRPAHGEKTLERIRGWRDVCPDLAIRSTFI
VGFPGETDEDFEMLLDWLDEAKIDRAGCFKYEPVKGARSNDLGLEQVPQEVKEARWHRFM
QRQQKISATQLAKKVGKRLPVLIDEAHGNAAKGRTKYDAPEIDGSVHIQSRRPMRAGDIV
TVKIERADAYDLYGSAV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccctcgcgtcagtttcgtcagccttggatgcccgaaggcgctcgtggattcc
gagcgcatcatcacgcgcctgcgcgccgagggctacgagatcgcccgcaagcatgacggc
gccgatctcgtcgtggtcaacacctgcggcttcctggattccgcccgcgacgaatcgctc
aacgccatcggttccgcgctttcggaaaacggcagggtcatcgtcaccggctgcctcggc
gccgagccggaggtgatccgcgagaagcaccccaatgtgctggcgatcaccggcccgcag
gcctatgagagcgtgatggccgccgtgcatgaggcagcacccccctcgcacgatccgtat
atcgatctgctgccaccgcaaggcgtcaagctgacgccgcgccactatgcctatcttaag
atttcggagggctgcaacaaccgctgcaccttctgcatcattcccgcactgcgcggcgac
ctcgtctcgcgccccgccgccgatgtgctgcgcgaagccgagaaactggccaaggccggc
gtcaaggaactcctcgtcatctcgcaggacaccagcgcctatggcatcgacatcaagtac
cagacatccatgttcggtgaccgcgaggtgcgcgcgaaattcctcgatctttcggaggaa
ctgggcaagctcggcatctgggtgcgcatgcactatgtctacccgtacccgcatgtcgcc
gacgtcatcccgctgatggccgaaggaaagatccttccctatctcgacattccgttccag
catgcctcgccgcaggtgctgaagaacatgcgccggccggcgcatggcgaaaagacgctc
gaacgcattcgcggctggcgcgacgtgtgcccggatctcgctattcgctcgaccttcatc
gtcggcttccccggcgagacggacgaggatttcgagatgctgctcgactggctggacgag
gccaagatcgaccgtgccggctgcttcaaatacgagccggtcaagggcgcccgctccaac
gacctcggcctcgagcaggttccgcaggaggtcaaggaagcacgctggcaccgcttcatg
cagcgccagcaaaagatctcggcaacgcaactggcaaaaaaggtcgggaagcgcctgccg
gtgctgatcgacgaggcgcacggcaacgctgcgaagggtcgcaccaaatacgacgcgccc
gagatcgacggttcggttcatatccagtcgcgccgcccaatgcgtgccggcgacatcgtc
accgtcaagatcgagcgcgccgacgcctatgatctctacggttcggctgtctga
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