Mesorhizobium erdmanii: EB233_22225
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Entry
EB233_22225 CDS
T06791
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
merd
Mesorhizobium erdmanii
Brite
KEGG Orthology (KO) [BR:
merd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
merd03016
]
EB233_22225 (rnd)
Enzymes [BR:
merd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EB233_22225 (rnd)
Transfer RNA biogenesis [BR:
merd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EB233_22225 (rnd)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QKC77876
UniProt:
A0A6M7UM68
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All DBs
Position
4478222..4479373
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AA seq
383 aa
AA seq
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MHVITTQKELETVLAAFEKSDFVTVDTEFIRETTFWPILCLIQMAAPGVTALIDPLSPDI
DLKPFFRLMANEAVVKVFHAARQDIEIIVHLGDLVPHPVFDTQVAAMVCGFGDSVSYDQL
VQRITGARLDKSSRFTDWRHRPLSDKQLDYALADVTHLIEVYQHLNAELKREDRAHWLNE
EMDVLTSRETYDPHPEDAWKRLKMRLRKPQELAIVQAVAAWREREARERDVPRGRVLKDD
AIYEVAQQAPRDAAALAKLRTTPKGWERSSTATALLTAVNTALSLPKEQMPKLPKNFQPP
EGSSAAAELLKVLLRIVAEKQGVASKVLASSDDIDRIAAEGEEADVPALQGWRRAVFGEQ
ALKLVRGEIGIKFDKRKIAVFDL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcatcaccacccagaaagaactcgagaccgttctcgccgctttcgaaaagtcg
gatttcgtcaccgtcgataccgagttcatccgcgaaacgaccttctggccgatcctgtgc
ctgatccagatggcggcccccggcgtgacggcgctgatcgatccgttgtcgccggacatc
gacctgaaacccttcttcagactgatggccaacgaggcggtggtgaaagtctttcatgcc
gcccggcaggacatcgaaatcatcgtccatctcggcgatctcgttccgcacccggtgttc
gacacgcaggtcgcggcaatggtctgcggcttcggcgacagcgtttcctacgaccagctg
gtgcagcgcatcaccggtgcgcggctcgacaagtcgtcgcgcttcaccgactggcgccac
cggccgttgtccgacaagcagctcgactacgccctggccgacgtcacccatctgatcgag
gtctatcagcacctcaatgccgaattgaaacgggaggatcgcgcccactggctgaacgag
gagatggacgtcctgacctcgcgcgagacatacgatccgcaccccgaagatgcctggaag
cggctgaagatgcggctgcgcaagcctcaggaattggccatcgttcaagccgtggctgca
tggcgcgagcgcgaggcgcgcgagcgcgacgtgccgcgcggacgcgtactcaaggacgac
gcgatctacgaggtggcgcagcaggcgccgcgcgacgcggcggcccttgccaagctgcgc
accacgcccaagggctgggagcgctcctcgacggcgacggccctgcttacggcggtcaac
acggcgctgtcgctgcccaaggagcagatgccgaagctgccgaagaatttccagccgccg
gagggctcgagcgccgcggcggaactgttgaaagtgctgctcaggatcgtcgccgaaaag
cagggggtggcgtcgaaagtgctcgcctccagcgacgatatcgaccgcatcgcggccgag
ggcgaggaagccgatgtgccggcgctgcaaggctggcggcgcgcggtgttcggcgaacag
gcgctgaaactggtgcgcggcgagatcgggataaaattcgacaagcgcaagatcgcggtg
ttcgacctgtag
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