Mesorhizobium erdmanii: EB233_29365
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Entry
EB233_29365 CDS
T06791
Name
(GenBank) peptidase C48
KO
K18879
type III effector protein XopD
Organism
merd
Mesorhizobium erdmanii
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C48
Motif
Other DBs
NCBI-ProteinID:
QKC79099
UniProt:
A0A6M7ULZ3
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All DBs
Position
complement(6017818..6021021)
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AA seq
1067 aa
AA seq
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MSQVQDLEEKQAGQARQVGFEQHVAEALRPLFDDRADEPPTNPEALLRLEQGFREMLQRG
QDDQAASSFFSDPGMPAGPGDLNSGVADAFAAAGSGHAGVDAAAPPVLAASQQQIRPSPD
ALEQGNHLPPERVIINNEHSTALLRTAERQRALNTPQAAAIQQPLSEIGNSVGRVPMQPP
MQQLGELPLEGVPVQGTGSEHIGRLHAEAAPSARSEAPPAAIEDSINVSFAVPKGFSHRT
QRVPDAMLSFLDPHAPLPDAGQARQVSFEQHVAEPRRADPAPGASGAREARYRHLSGEHR
DVIDKAIAHAAAQQHHSAATVRIYLHALRRLANDLGARGQAIDLKNHQSLVDHVDTFFPE
NHGMKTALNVLRAYHEPGYSAAAGRPAVPSKADARILEQLASDSSLGFGSRDNYGRNLRR
FSEALGSWGQTISGLDHNSRIKSAATLFPGNRNLFFALQRVRDAESASDRSVADAFAAAG
SGHAGVEAAAPPVLAASQQQIRPWPDALDQGNHLAPERVIINNEHSTALLWPAERQRALN
TPQAVAIQQPLSEIGNSGGRMPMQAPMQQLGELPLEGVPVQWTGSEHIGRLHAEAAPSAW
SEKPPAAIENSINVSFAVPKGFSHGIQGVPGAMLSSLDHYGYGLLPDAEKKEWNHEIEGR
GYAAERPEGRNDFSLVHRGPMSEAAAAAVPARAPGPVSPATARLSDTYRGVPLVDLTTTS
DARIGAFPSGSSNLPAGAVLGATELLSDAHIQRDYEFLEQQLQQADPALAARTRLVDPSV
SHLLRHMEQPDALGTLQSIYNRNADPPDFLFVPVNDGTPSNRGTHWSLLLVDRRDPQRTV
AYHYDSVQQNDSVHQNRRGYNDAPARELATRLDATILVTPEVAQQNNLVDCGVFVVDGTR
ELVLRLANQERPERQLPLDLNYLVADRQALQNRLRQGRLPHELAAIPADAFAAAGSQVQH
AVLQEQQARQVAPAPFEPHLGRTRESQDELTGTLDNRVNREGVIINTERYTVLLRPAKMQ
RTDNPQSFATGRQASEANTSSIRQDSDQTRADLMASSRSRERFDAGR
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgcaggtgcaggacttggaagagaagcaagcgggccaggcccggcaagtgggcttt
gagcagcacgtggccgaggcgctccggccgctgttcgatgatcgagctgacgagccgcca
accaatccagaggcgcttctgcgactggaacaggggttccgcgaaatgcttcagcgaggg
caggatgatcaagccgcctcgtcttttttcagcgacccagggatgcccgctggaccgggt
gacctcaacagcggcgtggcggacgctttcgcagcggccggctctgggcatgccggagtt
gatgccgccgccccgccagtgttagctgccagccaacagcagatccggccctcgccggat
gcgcttgaacagggcaaccacctgccacccgagcgggtcatcatcaacaatgaacattcc
acggcgctgttgcggacagcggagaggcagagggccctgaatacgccgcaagccgccgcc
attcagcagccgctgagcgaaatcggcaattcagtcggccgcgtgccgatgcagcccccc
atgcagcagttgggtgaattgccattggaaggggtaccggttcaaggcacagggtccgaa
cacatcggaaggctgcatgcggaggccgcgccctccgcaaggtctgaggcaccccccgct
gcgatcgaggactccatcaacgtctcattcgccgtccccaaaggcttctcccatcggact
caacgcgtcccagacgcgatgctctctttcttggacccccatgcccccttgccggatgcg
ggccaggcccggcaagtgagctttgagcagcacgtggccgaaccgcgccgagccgatccg
gctcctggcgcgagtggcgcccgtgaagcccgctatcgccacctgtccggcgaacaccgg
gacgttattgataaggcgatcgcccacgctgcggcccagcaacaccatagcgcggcgacg
gtccgaatatacttgcatgcgcttcgccgattggcgaatgatctcggcgctcgcggccaa
gcgattgatctaaaaaatcaccaatccctggtcgatcacgtcgatactttctttccggaa
aaccacggcatgaagacggcgttgaacgtcctgcgtgcgtatcacgagccgggctattca
gctgctgccgggcggccagcggtgccctcaaaggcagacgcgcgtatcttagaacaattg
gccagtgacagcagcttgggcttcggcagccgtgataactatggtcggaatcttcgcaga
ttttctgaagcgcttgggagctggggccagacgatctctgggctggatcacaattcgcgg
atcaaatccgccgcgacgttgtttccaggcaaccgcaatctcttcttcgcgttgcaacgg
gttcgtgatgcggagtccgcgtcagacagaagcgtggccgacgctttcgcagcggccggc
tctgggcacgccggagttgaggccgccgccccgccagtgttagctgccagccaacagcag
atccggccctggccggatgcgcttgaccagggcaaccacctggcacccgagcgggtcatc
atcaacaatgaacattccacagcgctgttgtggccagcggagcggcagagggccctgaat
acgccgcaagccgtcgccattcagcagccgctgagcgaaatcggcaattcaggcggccgc
atgccgatgcaggcccccatgcagcagttgggtgaattgccattggaaggggtaccggtt
caatggacagggtctgaacacatcggaaggctgcatgcggaggccgcgccctccgcatgg
tctgagaagccgcccgctgcgatcgagaactccataaacgtctcattcgccgtccccaaa
ggcttctcccatgggattcaaggcgtcccaggcgcgatgctctcttccttggaccattat
ggttatggcctcttgccggatgcggaaaagaaggagtggaaccacgagattgaaggtcgc
ggctacgccgccgagaggccagaagggcgcaacgacttttcgctcgtccatcgcggtccg
atgagcgaagctgcagcggcagcagtaccggcaagagctccaggacccgtctcgccagcg
accgccaggctttcagacacctatcgcggtgttccgttggtcgatctgaccaccacctcc
gatgctcggatcggagcttttccgtcaggctcatccaacctccccgcgggggcggtgctc
ggggccaccgaactgctaagcgacgcccatatccagagggattacgaattcctcgagcag
cagctgcagcaggcggatccagcgctcgccgctcgaacgcggctggtggatccgtcggta
tcccatctgctgcgccacatggagcagccagacgcgctaggcacattgcagtcgatttat
aatcgaaacgccgacccacccgacttcctattcgtgccagtgaacgatggcactcctagc
aaccgaggcacccattggtcgctgctgctcgtagatcgccgcgacccgcaaagaacggtc
gcctatcactacgactccgtccagcaaaacgactccgtccaccaaaatcgacggggatac
aatgacgcgcctgcccgagagctcgcaacaagactggacgcgaccatcctggtgacaccc
gaggtggcgcagcagaacaaccttgttgattgcggcgtgttcgtggtggacggcacgcgc
gagctggttcttcgattggcgaaccaagagcggccagaacggcagctgccactggacctc
aactacctcgtcgccgatcggcaggcgctgcaaaaccgactgaggcagggccgcttgccg
cacgagcttgccgcaatccccgcggatgctttcgcagcagccgggtcgcaggtgcaacat
gccgtcttgcaagagcagcaagcccgacaagtggcgccagcaccgtttgaaccgcacttg
ggcaggactcgcgagagccaggacgagctgacgggtacacttgacaaccgcgtgaacaga
gagggcgtcatcataaacactgaacgttacacagtgctgttgagaccggcgaagatgcag
aggactgacaatccgcaatccttcgccacggggcggcaagcgagcgaagcaaatacgtcg
tccatcaggcaagactccgatcaaacccgagcagacctcatggcttcctccagaagcaga
gagcgcttcgacgccggacgttga
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