Mesorhizobium erdmanii: EB233_30985
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Entry
EB233_30985 CDS
T06791
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
merd
Mesorhizobium erdmanii
Pathway
merd02020
Two-component system
merd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
merd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EB233_30985 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EB233_30985 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
merd03021
]
EB233_30985 (rpoN)
Transcription machinery [BR:
merd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EB233_30985 (rpoN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
WHD_RecQ_mid_bact
HTH_38
LacI
DUF7303
Motif
Other DBs
NCBI-ProteinID:
QKC79331
UniProt:
A0A6M7UQ29
LinkDB
All DBs
Position
6346921..6348375
Genome browser
AA seq
484 aa
AA seq
DB search
MESSASLLQRQKQSLVLTPQMMESIRLLQLAHPELHQFVEQEIEKNPFLERASNRAPKDI
PSISAGNPRIGPTTGGASDRASQWKSIRGKNNVQPAGNHAFEDSFTSIETLHDHVARQIA
LSAFAPLERRIAGELAGHLEDTGYLPVNLSELARSLNVREAVVEQVLGTLQQFDPPGIFA
RTLSECLEIQLRQLNRFDPAMAALVANLEALARRDFQTLKRHCGVDEDDLLDMLQEIRAL
DPKPGNRFQSGGPESIIPDVLVLPSPAGGWQIELNPDTLPRLLMNQNYFAEVSRLSAQNS
KDQSFLNECLQNANWLIRSLDQRAKTILKVAAEIIRQQDAFFEHGVAHLRPLNLRTVAEA
INVHQSTVSRVTSNKYMLTPRGVFELKYFFTVAIGSSEGGDAYSAEAVRHQIKAMVAVES
PDEVLSDDDIATRLKETGIDIARRTVAKYREALNIPSSARRRREKRVRLRCQSSQGGGAD
ESGS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggagtcctcagcaagcctgcttcagcgtcagaagcaatcgttggttttgacgccgcaa
atgatggaatccattcgcctgttgcaactggcgcatcccgaactgcatcagttcgtcgag
caagaaatcgagaagaacccctttctggaacgggcatcaaaccgggcgccgaaggacatt
ccgtcgatttcggccgggaacccgcgcatcgggccgaccacgggcggagcatcggatcgg
gcctcgcagtggaaatcaatccgcggcaaaaacaatgtccaaccggcgggaaaccatgct
ttcgaagattccttcacctccatcgaaacattgcacgaccatgtcgctcgtcagatcgct
ctcagcgcattcgcgccgctggagcggcgaatagctggcgaacttgccggtcatctggaa
gacaccggataccttccggtgaacctttcggaactggcccgcagcctgaatgtccgggag
gctgttgtggaacaagttcttggaaccttacagcagttcgatccaccgggtatttttgcg
cgaactctcagcgaatgccttgagatacagttgcggcagctgaataggttcgacccggcg
atggcagcgctggtcgccaatcttgaagcgctagcgcgacgcgattttcaaacattgaag
cgccattgcggtgtcgatgaagacgaccttctcgacatgttgcaagaaatccgcgcgctc
gatcccaagcctggaaatcgcttccaatccggagggcctgaatcgatcatacccgacgtc
ttggtcctgccctcgcccgcaggtgggtggcaaatcgaactcaatccagacacgctgccc
aggctcctgatgaaccaaaactattttgccgaggtctcacgcctaagcgcccaaaattcg
aaagaccagtcatttctcaacgagtgcctccaaaacgcgaactggctaatccgcagcctt
gatcagcgcgccaagacgatcctcaaggtagcggctgaaatcatccgccagcaggacgcc
ttttttgaacatggggtcgcccacctgcggcctctcaatctcaggactgtcgcggaggcg
atcaacgtgcaccagtcgacggtaagccgggtgacgtcgaacaagtacatgctgaccccg
cgcggcgtgttcgaactgaagtattttttcactgtcgcgatcggctcctccgaaggcggc
gacgcgtactccgctgaagccgtccgccatcaaatcaaggcgatggttgccgtggaatcg
cccgacgaagtgctttccgacgacgacatcgccacccggctcaaggaaaccgggatcgac
attgctcgccgaacagttgcgaaatatcgtgaggcgctgaacatcccgtcctccgcgcgc
cgtcgccgggaaaagcgcgtgcggcttcgatgccaatcaagccagggcggcggcgccgac
gagagcggctcttaa
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