KEGG   Mesorhizobium erdmanii: EB233_30985
Entry
EB233_30985       CDS       T06791                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
merd  Mesorhizobium erdmanii
Pathway
merd02020  Two-component system
merd02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:merd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    EB233_30985 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    EB233_30985 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:merd03021]
    EB233_30985 (rpoN)
Transcription machinery [BR:merd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EB233_30985 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_3 WHD_RecQ_mid_bact HTH_38 LacI DUF7303
Other DBs
NCBI-ProteinID: QKC79331
UniProt: A0A6M7UQ29
LinkDB
Position
6346921..6348375
AA seq 484 aa
MESSASLLQRQKQSLVLTPQMMESIRLLQLAHPELHQFVEQEIEKNPFLERASNRAPKDI
PSISAGNPRIGPTTGGASDRASQWKSIRGKNNVQPAGNHAFEDSFTSIETLHDHVARQIA
LSAFAPLERRIAGELAGHLEDTGYLPVNLSELARSLNVREAVVEQVLGTLQQFDPPGIFA
RTLSECLEIQLRQLNRFDPAMAALVANLEALARRDFQTLKRHCGVDEDDLLDMLQEIRAL
DPKPGNRFQSGGPESIIPDVLVLPSPAGGWQIELNPDTLPRLLMNQNYFAEVSRLSAQNS
KDQSFLNECLQNANWLIRSLDQRAKTILKVAAEIIRQQDAFFEHGVAHLRPLNLRTVAEA
INVHQSTVSRVTSNKYMLTPRGVFELKYFFTVAIGSSEGGDAYSAEAVRHQIKAMVAVES
PDEVLSDDDIATRLKETGIDIARRTVAKYREALNIPSSARRRREKRVRLRCQSSQGGGAD
ESGS
NT seq 1455 nt   +upstreamnt  +downstreamnt
atggagtcctcagcaagcctgcttcagcgtcagaagcaatcgttggttttgacgccgcaa
atgatggaatccattcgcctgttgcaactggcgcatcccgaactgcatcagttcgtcgag
caagaaatcgagaagaacccctttctggaacgggcatcaaaccgggcgccgaaggacatt
ccgtcgatttcggccgggaacccgcgcatcgggccgaccacgggcggagcatcggatcgg
gcctcgcagtggaaatcaatccgcggcaaaaacaatgtccaaccggcgggaaaccatgct
ttcgaagattccttcacctccatcgaaacattgcacgaccatgtcgctcgtcagatcgct
ctcagcgcattcgcgccgctggagcggcgaatagctggcgaacttgccggtcatctggaa
gacaccggataccttccggtgaacctttcggaactggcccgcagcctgaatgtccgggag
gctgttgtggaacaagttcttggaaccttacagcagttcgatccaccgggtatttttgcg
cgaactctcagcgaatgccttgagatacagttgcggcagctgaataggttcgacccggcg
atggcagcgctggtcgccaatcttgaagcgctagcgcgacgcgattttcaaacattgaag
cgccattgcggtgtcgatgaagacgaccttctcgacatgttgcaagaaatccgcgcgctc
gatcccaagcctggaaatcgcttccaatccggagggcctgaatcgatcatacccgacgtc
ttggtcctgccctcgcccgcaggtgggtggcaaatcgaactcaatccagacacgctgccc
aggctcctgatgaaccaaaactattttgccgaggtctcacgcctaagcgcccaaaattcg
aaagaccagtcatttctcaacgagtgcctccaaaacgcgaactggctaatccgcagcctt
gatcagcgcgccaagacgatcctcaaggtagcggctgaaatcatccgccagcaggacgcc
ttttttgaacatggggtcgcccacctgcggcctctcaatctcaggactgtcgcggaggcg
atcaacgtgcaccagtcgacggtaagccgggtgacgtcgaacaagtacatgctgaccccg
cgcggcgtgttcgaactgaagtattttttcactgtcgcgatcggctcctccgaaggcggc
gacgcgtactccgctgaagccgtccgccatcaaatcaaggcgatggttgccgtggaatcg
cccgacgaagtgctttccgacgacgacatcgccacccggctcaaggaaaccgggatcgac
attgctcgccgaacagttgcgaaatatcgtgaggcgctgaacatcccgtcctccgcgcgc
cgtcgccgggaaaagcgcgtgcggcttcgatgccaatcaagccagggcggcggcgccgac
gagagcggctcttaa

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