Mesorhizobium erdmanii: EB233_31120
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Entry
EB233_31120 CDS
T06791
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
merd
Mesorhizobium erdmanii
Pathway
merd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
merd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EB233_31120 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
merd03000
]
EB233_31120 (nifA)
Transcription factors [BR:
merd03000
]
Prokaryotic type
Helix-turn-helix
Other families
EB233_31120 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
AAA
GAF_2
Mg_chelatase
AAA_2
AAA_3
MCM
bpMoxR
GAF_3
AAA_30
AAA_16
MS_N
Motif
Other DBs
NCBI-ProteinID:
QKC79352
UniProt:
A0A6M7UR28
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All DBs
Position
6374799..6376625
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AA seq
608 aa
AA seq
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MDDHMQHDARNSEQSARRISSRCISLPKMKRPNSKSEMNDVVPVVPLHERALDIFETSKA
LTAPSGLEATLANVVDLLPSLVQVRHGIISLCGGAGIPDMTVGAGWSEDSDVRYRKHLPR
TAIDQIITTGMALVAENIALDPAFNAADKDVLGASDNMNVSFIGVPIRVDANVVGTLTID
RILDNKSGSLLDHDLRLLTTIANLVGQTVKLHRMFASDPERLMAERIRMQKQFGELEQPG
HEGKRAHVKGIIGDSPALRGLLEKVALVARSNSTVLLRGESGTGKELVAKAVHELSGRAK
RPFIKLNCAALPETVLESELFGHEKGAFTSAFNTRKGRFELADKGTLFLDEIGEISASFQ
AKLLRVLQEQEFERVGSNQTIKVDVRVIAATNRNLEDAVARNEFRADLYYRISVVPLLVP
PLRERRGDIPLLAAEFLKNFNSENGRTMVFDASATEVLMNCAFPGNVRELENCVQRTATL
AAGTPIVRNDFDCSHGRCLSAMLWKHASKETSPKFEAIAPSPLNPAMKSSGAFASAAVAT
PPVDSEQALPAPDRIGLVSDGKMTDRERLIAAMERSGWVQAKAARLLGLTPRQIGYALRK
YGIEIKCL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcacatgcaacacgatgctcgcaactccgagcaaagtgccaggcggatctcg
tcacgctgcatatcgcttccaaaaatgaaaaggcccaattcaaagtccgagatgaatgac
gtggtccctgttgtgccgttgcacgagagggctctggacatctttgaaacgtcaaaagcg
ctcaccgctccgtctggactggaagccacgttggccaacgtcgtcgatctcctgccatcg
ttggtgcaggtgcggcacggcatcatctcgctctgcggtggtgccggcataccggacatg
accgtcggcgccggctggagcgaagacagcgatgtgcgctaccggaagcatctgccacgg
acggcgatcgaccagatcataacgacgggcatggcgctcgtcgccgagaacatagcgttg
gatccggcctttaacgccgccgacaaggacgtgctcggggcgtccgacaacatgaatgtg
tcgttcatcggcgtacccattcgcgtcgatgcgaacgtcgtgggcacgctgaccatcgac
cgcatcctggacaacaaatcaggttcccttctcgatcacgacctccgcctcctcaccaca
atcgccaatctggttgggcagacagtgaagctgcatcgcatgttcgcgtccgaccccgag
cgactgatggccgagagaatccggatgcaaaagcaattcggcgaactcgagcagcctggc
catgagggcaagagggctcatgtcaaggggatcattggcgacagcccggcgctgcgcggg
ctgctcgagaaggtcgcgttagtggccaggtccaacagcaccgttttgctgcgcggcgaa
tccgggaccggcaaggagctggtcgccaaggccgttcacgagctgtcggggcgcgccaag
cggccgttcatcaagctcaattgcgcagcgctccctgagacggtcctggaatccgaactg
ttcggtcacgaaaagggtgcctttaccagtgcattcaacacgcgcaaggggcgctttgag
ctcgccgacaaggggacgttgtttctggacgagatcggtgagatttcggcctcgttccag
gcaaagctgctgcgcgtgctgcaggagcaggagttcgagcgcgtcggcagcaaccagacg
attaaggtcgacgttcgcgtgattgccgccacgaacaggaatctggaagacgcggttgca
aggaacgagtttcgcgccgacctttattaccgcatcagcgttgttcccttgctggtgccg
ccattgcgcgaaaggcgcggtgatattccgctccttgccgctgagtttctcaagaatttc
aacagcgagaatggccgtacgatggtcttcgatgcgagtgcgactgaagtgctgatgaac
tgtgcttttcccggaaatgtccgcgagcttgaaaattgcgtgcagcggacagcgaccctc
gcagcgggaacgccaatcgtcagaaacgactttgactgctcacacggccgatgcctttcc
gcgatgttatggaagcacgcgtctaaggagacttcgccgaaattcgaggcgatcgcacca
tcgccactaaacccggccatgaaatcatctggtgcctttgcatcggccgccgttgcgacc
ccgcctgttgacagcgagcaggcactgccagcgcctgatcggataggcctcgtgagcgac
gggaagatgaccgatcgcgagcgtctcatcgcggcgatggaaagatccggctgggtacag
gcaaaggcagcgcgcctgcttggattgacgccgcgccagattggctacgcgctgaggaaa
tacggtatcgagatcaagtgtctctga
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