KEGG   Mesorhizobium erdmanii: EB233_32090
Entry
EB233_32090       CDS       T06791                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
merd  Mesorhizobium erdmanii
Brite
KEGG Orthology (KO) [BR:merd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:merd03400]
    EB233_32090
Enzymes [BR:merd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EB233_32090
    5.6.2.6  RNA 3'-5' helicase
     EB233_32090
DNA repair and recombination proteins [BR:merd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    EB233_32090
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C Cas3-like_C_2 ResIII
Other DBs
NCBI-ProteinID: QKC79493
UniProt: A0A6M7UU55
LinkDB
Position
complement(6579031..6581745)
AA seq 904 aa
MRGGANLRLFALTASLQSLAPPLTCLPASSPRKRGEEMLPRSRFVPILLGDCPWPRYLWR
VTVEPRLAEQNATMALPEPFVRWFGEKGWSPRAHQIELLAKARSGQSVLLIAPTGAGKTL
AGFLPSLTELAVRPRRKPGQAHRGIHTLYISPLKALAVDIERNLGKPVEEIGLPISIETR
TGDTPSHKRQRQKLVPPDILLTTPEQLALLIAASDARRFFEDLRYVVLDELHSLVTSKRG
HLLALGLARLRSFVPGIQTIGLSATVAEPDELRRWLVSQNPPGDMSELIVVTGGAKPEIS
ILDSEERVPWAGHSARYATPEIYREIKRHKTTLLFVNTRSQAELLFQELWRVNEDTLPIA
LHHGSLDVAQRRRVEKAMGDNALRAIVATSTLDLGIDWGDVDLVVHVGAPKGASRLAQRI
GRANHRMDEPSKAILIPANRFEVLECRAALDANYLGAQDTPPLVDGGLDVLAQHVLGCAC
GAPFRADDLYEEVRTAAPYASLDRPTFDRVIDFVATGGYALKNYERYARIRRNKDGLWRV
SNPRVAQQYRLNVGTIIEVPALNVRYVKAGSKGSAARGGAVLGKIEEAFLETLTHGDTFM
FAGKVLRFEGIRENECFVSNAPGSDAKVPYYGGGKFPLSTYLAEQVRIMLDDPQRWRELP
EQVADWLRFQADKSILPKRDDLLIETFPRGNRYYLVAYPFEGRLAHQTLGMLLTRRLDRA
GARPLGFVATDYALAIWSLGDMGAMFKARKPSLGALFDQDMLGDDLEAWLADSWLLKRTF
RNCALISGLIEKRHPGQEKSGRQVTVSTDLVYDVLRSHEPDHILLQATRADAAAGLLDVS
RLADMLSRIQGRIMHKNLEQISPLAVPIMLEIGKMPVNGEADETLLMDAATLVEEAMGPE
MVEE
NT seq 2715 nt   +upstreamnt  +downstreamnt
atgaggggcggcgcgaacctgcgattgttcgcgctgacagccagcttgcaatcgctggcg
ccgcccctcacctgcctgccggcatcctctccccgtaaacggggcgaggaaatgcttcca
cgatcccgttttgttccgattcttcttggcgattgcccctggccgcgctacctctggcgc
gtgacagttgagccgcgcctagccgaacagaatgccaccatggccctgcccgagccattc
gtcagatggttcggcgaaaagggctggtcgccgcgcgcccatcagatcgaattgttggcc
aaggcccggagcgggcaatccgtcctcctgatcgcgccgaccggggccggcaagacattg
gccggcttcctgccctcgctgactgaactcgccgtcaggccaaggcgaaagccggggcag
gcgcatcgcggcatccacacgctctacatctcgccgctcaaggcgctggccgtcgacatc
gagcgcaatctcggcaagccggtcgaggagatcggactgccgatctcgatcgagacgcgc
acgggcgacacgccatcccacaagcgccagcggcagaagctggtgccgcctgacatcctg
ctcaccacgccggagcaattggcactgttgatcgccgcctccgacgccaggcggttcttc
gaggacctgcgctatgtcgtgctcgacgaattgcattcgctggtgacgtcgaaacgcggc
catctcttggcgcttggcctggcgcggctgcgcagcttcgtcccaggcattcaaacgatt
ggcctttcggcgaccgtggccgaaccggacgaactgcggcgatggctggtcagccagaat
ccaccgggtgatatgtcggaacttattgtcgtcaccggcggcgcgaagcccgagatttcc
atcctcgattccgaggagcgtgtgccgtgggcggggcattcggcccgctacgccacgccc
gagatctatcgcgagatcaagcgtcacaagacgaccctgctgttcgtcaacacccgcagc
caggcggaactgctgttccaggaattatggcgggtcaacgaggacaccttgccgatcgca
ctacaccacggctcgctagacgtcgcccagcgccggcgcgtcgagaaggcgatgggcgac
aacgcgctgcgcgccatcgtcgccacttctacgctcgatctcggcatcgactggggcgat
gtcgatctggtggtgcatgtcggcgcaccgaagggggcgagccggctggcgcaacgcatc
ggccgcgccaaccaccgtatggacgagccttcaaaggcgatcttgatccccgccaaccgg
ttcgaggtcctggaatgccgggccgcgctcgatgccaactatctcggcgcacaggatacg
ccgccgctggtcgatggcggcctcgatgtgctggcgcagcatgtgctcggctgcgcctgc
ggcgcaccgttccgtgccgatgatctctatgaggaggtgcgaacggcggcaccctatgca
agcctcgaccggccgacattcgaccgcgtcatcgatttcgtcgccaccggcggctatgcg
ctgaagaattacgagcgctacgcccgcatccgccggaacaaggatggcctttggcgggtt
tccaatccgcgcgttgcccagcaatacaggctcaatgtcggcaccatcatcgaagtgccg
gcgctcaatgtgcgttacgtcaaggctggcagcaaaggatcggctgcgcgcggcggcgcg
gtcctcggcaagatcgaggaggccttcctcgaaacgctgacgcatggcgacaccttcatg
tttgccggcaaggtgttgcgcttcgaaggcattcgcgaaaatgagtgcttcgtgtcgaat
gcgcccggcagcgacgccaaggtgccctattatggcggcggcaagtttccgctttcgacc
tatctcgccgaacaggtccgcatcatgctggatgacccgcaacgctggagggagctgccg
gaacaggtggctgactggctgcggttccaggccgacaagtcgatcctgcccaagcgcgat
gatctgctgatcgagacctttccacgtggcaaccgctattatctggtcgcctatcccttc
gaaggcaggctggcgcaccagacgctcggcatgctcttgacccgccgcctggaccgggcg
ggcgccaggccgcttggctttgtcgccaccgactatgcgctggccatatggtcgctgggc
gacatgggcgcgatgttcaaagcccgaaaaccctcgctcggcgcgctgttcgaccaggac
atgctgggcgacgatctcgaagcctggctggccgatagctggcttctcaagcgtaccttc
cgcaattgcgcgctgatttcggggctgatcgagaaacgtcatcccggccaggagaaaagt
ggccgccaggtcaccgtgtcgaccgatctcgtttacgatgtgctacgcagccatgagccc
gaccatatcctgcttcaggcgacacgtgccgacgcggcggccggtctgctcgatgtcagc
agacttgccgacatgctctcgcgcatacagggtcgaatcatgcataagaatctggagcag
atctcgccgcttgccgtgccgatcatgcttgagatcggcaagatgccggtcaacggcgaa
gccgatgaaacactgctgatggatgcggccacgctagtcgaagaggccatggggccggaa
atggtcgaggaatga

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