Chelativorans sp. BNC1: Meso_0003
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Entry
Meso_0003 CDS
T00374
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
mes
Chelativorans sp. BNC1
Pathway
mes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Meso_0003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mes03400
]
Meso_0003
DNA repair and recombination proteins [BR:
mes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Meso_0003
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
ABC_tran
AAA_29
DUF2813
AAA_22
AAA_27
SbcC_Walker_B
Zeta_toxin
NACHT
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABG61408
UniProt:
Q11MG7
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Position
2827..4002
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AA seq
391 aa
AA seq
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MTTTATTGTPEKRPAQVHIAKLTLSNFRNYASLSLGLQPGAVVLTGENGAGKTNLLEAIS
FLSPGRGLRRATLEEAMRIGSSDGFAVHAEVEGPYGSCRIGTGTAGTAAEGSESGRRVRI
DGEPQRSAEAMLDWLRVIWLTPAMDALFTGASADRRRFLDRLVLAIDPAHGRRAADYEKA
MRSRNRLFADDVRDDAWFDAIEMQMAETGVAIAAARAEMLRLLAAMIERLPAGSPFPKAL
LALEGTVDEAIARNPAVEVEEDFRTRLREERPRDRAAGRALEGPHRSELLVRHAPKDMPA
ESCSTGEQKALLVGLVLAHARLTAELSGMAPILLLDEISAHFDADRRAALFDILEDLNCQ
AFMTGTERALFSSLEGRAQFLAVSGGAIQSV
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacgacggccacgacaggaactccggaaaagcggccggcgcaggtccatatcgcc
aagctgacgctctccaattttcgcaactacgcctcgctctcgctcggcctgcagcctggc
gcggtggtgcttaccggcgagaacggcgccggcaagacgaacctgctcgaagcaatctcc
tttctctcccccggtcgtggactgcggcgcgccacattggaagaggcgatgcgcatcggc
tccagcgatggttttgcggtgcatgcggaggtggaaggaccttatggctcctgtcggatt
gggacgggaacggccggtacggcagctgagggatcagaatccgggcgacgtgtgcgcatc
gatggcgagccccagcgcagcgctgaagccatgctcgattggttgcgggtgatctggctt
accccggctatggacgcgctcttcaccggggcttcggctgatcgcaggcgctttttggac
cgccttgtcctggcaatcgatccagcgcatggccgccgggcggcggattatgaaaaagcc
atgcgctcccgcaaccggcttttcgcggatgatgtgcgggacgatgcctggttcgatgcc
atcgagatgcagatggccgaaaccggcgtggcgattgccgcggcgcgtgccgagatgttg
cggctgcttgccgcaatgattgagcgtcttcctgccggcagtccctttcccaaggcgctg
ctcgcgctagaaggcacggtggacgaggcgattgcacgaaacccggctgtcgaggttgag
gaggatttccgtactcgcttgcgcgaagagcgcccgagagaccgcgcggcggggcgggcg
ctcgaagggccgcaccgcagcgagctcctggtgcgccatgcgcccaaggacatgccggcg
gaaagctgttcgaccggagaacaaaaggcgcttctcgttgggctcgtgcttgcccatgca
cggctgaccgctgagctttcaggcatggcgccgattctgctcctggacgaaatctccgcc
catttcgatgccgatcgccgcgcggccctcttcgacatcctcgaggatctcaactgccag
gccttcatgaccggtacggaacgcgcgctcttctccagcctggagggccgggcccaattt
ctcgccgtatcgggcggcgcaattcagtcggtttga
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