Chelativorans sp. BNC1: Meso_0357
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Entry
Meso_0357 CDS
T00374
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mes
Chelativorans sp. BNC1
Pathway
mes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Meso_0357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mes03019
]
Meso_0357
03110 Chaperones and folding catalysts [BR:
mes03110
]
Meso_0357
03029 Mitochondrial biogenesis [BR:
mes03029
]
Meso_0357
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mes04147
]
Meso_0357
Enzymes [BR:
mes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Meso_0357
Messenger RNA biogenesis [BR:
mes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Meso_0357
Chaperones and folding catalysts [BR:
mes03110
]
Heat shock proteins
HSP60 / Chaperonin
Meso_0357
Mitochondrial biogenesis [BR:
mes03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Meso_0357
Exosome [BR:
mes04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Meso_0357
Exosomal proteins of other body fluids (saliva and urine)
Meso_0357
Exosomal proteins of breast cancer cells
Meso_0357
Exosomal proteins of colorectal cancer cells
Meso_0357
Exosomal proteins of bladder cancer cells
Meso_0357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABG61761
UniProt:
Q11LG4
LinkDB
All DBs
Position
complement(399629..401263)
Genome browser
AA seq
544 aa
AA seq
DB search
MAAKDVKFSRDARERMLRGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVQEGAKAVAAGMNPMDLKRGV
DLAVAEVVDYLAKAAKKIKTSEEVAQVGTISANGEKEIGQMIAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFITNPEKMVAELEDVYILLHEKKLSNLQAMLPVLEAV
VQSGRPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAVLTGGQV
ISEDLGIKLENVTLDMLGRAKRVSIAKETTTIVDGAGQKSEIEGRVAQIKSQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVPGGGTALL
RASSEIKAKGENADQEAGVNIVRRAIQAPARQIASNAGAEASIVVGKILDNNAVTFGYNA
QTGEYGDMIGMGIVDPMKVVRTALQDAASVAGLLITTEAMIAELPKKDSPAPAMPGGGMG
GMDF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagacgtaaaattttcccgtgatgcccgcgagcgtatgcttcgcggcgtc
aacatccttgccgacgcggtgaaggtgacgctcggcccgaagggccgcaacgtcgtgctc
gacaagtccttcggcgccccgcgcatcacgaaggacggcgtgaccgtcgccaaggaaatc
gagcttgaggacaagttcgagaatatgggcgcccagatggtgcgcgaagtggcgtcgaag
accaacgacatcgccggcgacggcaccacgacggccaccgttctcgcccaggcgatcgta
caggaaggcgcaaaggccgttgccgccggcatgaacccgatggacctgaagcgcggcgtt
gatctggccgttgccgaagtcgtcgattacctggccaaggcggccaagaagatcaagacc
tccgaagaggttgcccaggtcggcacgatttccgccaatggcgagaaggaaatcggccag
atgattgccgaggccatgcagaaggtcggcaatgagggcgtgattactgtcgaggaagcc
aagaccgccgagaccgagcttgaagtggtcgagggcatgcagttcgaccgcggctatctc
tctccgtacttcatcaccaacccggagaagatggtggcggagctcgaggacgtttacatc
ctcctgcacgagaagaagctctccaacctccaggccatgctgcctgtgctcgaagctgtg
gtgcagtcgggcaggccgctgcttatcatcgccgaggacgtcgagggcgaggctctcgcc
acgctggtggtcaacaagctgcgtggcggcctgaagatcgcagccgtgaaggcaccgggc
ttcggcgaccgccgcaaagccatgctcgaagacatcgcggtcctcacgggcggccaggtg
atctccgaagatctcggcatcaagctcgagaacgtcacgctcgacatgctgggccgtgcc
aagcgcgtttccatcgccaaggagacgaccaccatcgttgacggtgccggccagaaaagc
gagatcgaaggccgcgttgcccagatcaagtcgcagatcgaggagaccacctccgattac
gaccgcgagaagctgcaggagcgcctggccaagctcgccggcggcgtcgcggtgatccgc
gtcggcggtgcgaccgaggtagaggtgaaggagaagaaggaccgcgtggacgatgcgcta
aacgccacccgcgcggccgtcgaggaaggcattgttccgggcggcggcaccgcacttctg
cgcgcctccagcgaaatcaaggccaagggcgagaatgccgaccaggaggccggcgtgaac
atcgttcgccgcgcaatccaggctcctgcccgccagatcgcttcgaatgcgggcgccgag
gcttcgatcgtcgtcggcaagattctcgacaacaacgccgtcacgttcggttacaatgcc
cagacgggcgaatatggcgacatgatcggcatgggcatcgtggacccgatgaaagtggtc
cgcaccgctcttcaggacgcggcttcggtcgccggcctgctgatcaccaccgaggccatg
atcgccgagctgccgaagaaggactcgccggccccggcgatgccaggcggcggcatgggc
ggcatggatttctaa
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