KEGG   Chelativorans sp. BNC1: Meso_0357
Entry
Meso_0357         CDS       T00374                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
mes  Chelativorans sp. BNC1
Pathway
mes03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mes00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Meso_0357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mes03019]
    Meso_0357
   03110 Chaperones and folding catalysts [BR:mes03110]
    Meso_0357
   03029 Mitochondrial biogenesis [BR:mes03029]
    Meso_0357
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mes04147]
    Meso_0357
Enzymes [BR:mes01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     Meso_0357
Messenger RNA biogenesis [BR:mes03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Meso_0357
Chaperones and folding catalysts [BR:mes03110]
 Heat shock proteins
  HSP60 / Chaperonin
   Meso_0357
Mitochondrial biogenesis [BR:mes03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    Meso_0357
Exosome [BR:mes04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Meso_0357
  Exosomal proteins of other body fluids (saliva and urine)
   Meso_0357
  Exosomal proteins of breast cancer cells
   Meso_0357
  Exosomal proteins of colorectal cancer cells
   Meso_0357
  Exosomal proteins of bladder cancer cells
   Meso_0357
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: ABG61761
UniProt: Q11LG4
LinkDB
Position
complement(399629..401263)
AA seq 544 aa
MAAKDVKFSRDARERMLRGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVQEGAKAVAAGMNPMDLKRGV
DLAVAEVVDYLAKAAKKIKTSEEVAQVGTISANGEKEIGQMIAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFITNPEKMVAELEDVYILLHEKKLSNLQAMLPVLEAV
VQSGRPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAVLTGGQV
ISEDLGIKLENVTLDMLGRAKRVSIAKETTTIVDGAGQKSEIEGRVAQIKSQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVPGGGTALL
RASSEIKAKGENADQEAGVNIVRRAIQAPARQIASNAGAEASIVVGKILDNNAVTFGYNA
QTGEYGDMIGMGIVDPMKVVRTALQDAASVAGLLITTEAMIAELPKKDSPAPAMPGGGMG
GMDF
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggctgcaaaagacgtaaaattttcccgtgatgcccgcgagcgtatgcttcgcggcgtc
aacatccttgccgacgcggtgaaggtgacgctcggcccgaagggccgcaacgtcgtgctc
gacaagtccttcggcgccccgcgcatcacgaaggacggcgtgaccgtcgccaaggaaatc
gagcttgaggacaagttcgagaatatgggcgcccagatggtgcgcgaagtggcgtcgaag
accaacgacatcgccggcgacggcaccacgacggccaccgttctcgcccaggcgatcgta
caggaaggcgcaaaggccgttgccgccggcatgaacccgatggacctgaagcgcggcgtt
gatctggccgttgccgaagtcgtcgattacctggccaaggcggccaagaagatcaagacc
tccgaagaggttgcccaggtcggcacgatttccgccaatggcgagaaggaaatcggccag
atgattgccgaggccatgcagaaggtcggcaatgagggcgtgattactgtcgaggaagcc
aagaccgccgagaccgagcttgaagtggtcgagggcatgcagttcgaccgcggctatctc
tctccgtacttcatcaccaacccggagaagatggtggcggagctcgaggacgtttacatc
ctcctgcacgagaagaagctctccaacctccaggccatgctgcctgtgctcgaagctgtg
gtgcagtcgggcaggccgctgcttatcatcgccgaggacgtcgagggcgaggctctcgcc
acgctggtggtcaacaagctgcgtggcggcctgaagatcgcagccgtgaaggcaccgggc
ttcggcgaccgccgcaaagccatgctcgaagacatcgcggtcctcacgggcggccaggtg
atctccgaagatctcggcatcaagctcgagaacgtcacgctcgacatgctgggccgtgcc
aagcgcgtttccatcgccaaggagacgaccaccatcgttgacggtgccggccagaaaagc
gagatcgaaggccgcgttgcccagatcaagtcgcagatcgaggagaccacctccgattac
gaccgcgagaagctgcaggagcgcctggccaagctcgccggcggcgtcgcggtgatccgc
gtcggcggtgcgaccgaggtagaggtgaaggagaagaaggaccgcgtggacgatgcgcta
aacgccacccgcgcggccgtcgaggaaggcattgttccgggcggcggcaccgcacttctg
cgcgcctccagcgaaatcaaggccaagggcgagaatgccgaccaggaggccggcgtgaac
atcgttcgccgcgcaatccaggctcctgcccgccagatcgcttcgaatgcgggcgccgag
gcttcgatcgtcgtcggcaagattctcgacaacaacgccgtcacgttcggttacaatgcc
cagacgggcgaatatggcgacatgatcggcatgggcatcgtggacccgatgaaagtggtc
cgcaccgctcttcaggacgcggcttcggtcgccggcctgctgatcaccaccgaggccatg
atcgccgagctgccgaagaaggactcgccggccccggcgatgccaggcggcggcatgggc
ggcatggatttctaa

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