Chelativorans sp. BNC1: Meso_0546
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Entry
Meso_0546 CDS
T00374
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mes
Chelativorans sp. BNC1
Pathway
mes03420
Nucleotide excision repair
mes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Meso_0546
03430 Mismatch repair
Meso_0546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mes03400
]
Meso_0546
Enzymes [BR:
mes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Meso_0546
DNA repair and recombination proteins [BR:
mes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Meso_0546
MMR (mismatch excision repair)
Other MMR factors
Meso_0546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
UvrD_C
AAA_16
DEAD
nSTAND3
ResIII
FtsK_SpoIIIE
TIP49
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABG61949
UniProt:
Q11KX6
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All DBs
Position
606314..608023
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AA seq
569 aa
AA seq
DB search
MKLELCDKRKAIIAQTGHLLVLGGPGSGKTTIALFKAQGRFATLKPGQEVLFLSFSRAAI
RQVLLRCKEILTPSQRRAVVVQTYHAFCMEMLEAHGRLLHGRSVRFLYPGEERLQKSAFD
GDWSVERKRQAAEMGLYCFDLFAAGTADLLEGCAALRGLVADRFPMIIVDEFQDTDDNQW
RIVRALAQVTDVFCLADPEQRIFDYRDDIDPRRLDILREAVAIAEFDLGGENHRSPNAGI
LHFADAVLRNQGPLPVTPDVKQVSYWGNAFSATVHAAVIWTFSALRRKGVEKPSVAVLSR
SNSLISDLSVILSEPHTYNNQLLSVIEHDVVWDAELSAAAAIVVASILEWPTGLAAESLA
RTLLAIAGFYKLKNAEEQTNTAAENARKYDEAAAKVAKGEEPRIKAAKALVAAHAAGVAL
IGEPVADWKVARRLLQDIPALSELFREVRLVRLFRATDALASGLSERWLASGSYRGASDL
VKRILEQERLIAAERDSQFGCILMNMHKAKGKEFDGVVLVEGAFKSGFFDERTEQPPFER
SRRLLRVGLTRARTLVTIVRPQNARPLVD
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggagctgtgcgacaagcgaaaggcgatcatcgcgcagaccgggcacctgctg
gtgctcggtggaccgggctcaggcaagacgacgatcgcgcttttcaaggcacaaggccgc
ttcgcgacgctcaagcccggtcaggaagttctgttcctgagcttctctcgcgcggcgatc
cgtcaggtcctcctacgctgcaaagaaatcctgacgccgagccagcgccgggccgtcgtg
gtccagacctaccacgctttctgcatggagatgctggaagcacatgggcggctgttgcat
gggcggtcggtgcgttttctttaccctggcgaggaacggcttcagaagtccgcgttcgac
ggggactggagtgtcgagcgcaagcgtcaggcagcagaaatggggctttattgctttgac
ctatttgcggcgggcacggccgatctgctcgaaggctgcgcggcgctacgcgggctagtc
gctgatcggttcccaatgattatcgtcgatgagttccaggacaccgacgataatcagtgg
cggatcgtgcgggcgctcgcccaagtgaccgacgtattctgtctggcggatccggagcag
cggatcttcgattatcgggacgacatcgatcctcgccggctggacattctgcgcgaggct
gtcgcgatcgccgaattcgatctcggtggcgaaaaccacaggagtccgaacgccggcatc
ctccattttgccgatgcggtgttgcgtaatcaaggtccgctgccggtgacacctgacgtc
aaacaggtgagctattgggggaacgctttctccgcgacggttcatgcggcggtaatctgg
actttcagtgcgttgcgaagaaaaggtgtcgagaagccgagtgtcgcggtgctgtcgcgg
agcaactcgctgatctctgacctttcggttatcctttccgagcctcacacctacaacaac
cagctgctctccgtcattgagcatgatgtcgtgtgggatgcggagctatcggctgcggcg
gcaatcgtggtcgcatcgatcctggagtggccgacggggctggccgcggagagcttggcg
cggacgcttctggcgatcgccggcttctacaagctgaagaacgcggaagagcaaaccaac
acggcagccgagaacgctcgcaaatatgacgaggctgcggccaaggtggcgaagggtgag
gaaccgcggatcaaagccgcgaaggcattggtcgccgctcatgcagccggtgtcgcgttg
atcggcgagccggtggcggactggaaggtggcgcgtcgcctgcttcaggacatccctgcg
ctcagcgaattattccgcgaagtgcggcttgtccgcctcttcagggcgacggatgccctg
gcatcgggccttagtgaacgctggcttgcatcaggcagttaccggggtgcgagtgacctc
gtgaagcgcatccttgaacaggagcggctcatcgctgccgagcgcgattcacagttcggc
tgcattctgatgaatatgcacaaggccaaaggcaaagagttcgatggcgtggtgcttgtt
gaaggtgccttcaagtcggggttctttgacgaaaggactgagcaacccccatttgagcgc
agccgccggttattgcgagtgggtttgacgcgggcgcggacactggtgacgattgttcga
cctcaaaatgcgaggcctttggtcgactag
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