Chelativorans sp. BNC1: Meso_0909
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Entry
Meso_0909 CDS
T00374
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mes
Chelativorans sp. BNC1
Pathway
mes03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Meso_0909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mes03400
]
Meso_0909
Enzymes [BR:
mes01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Meso_0909
DNA repair and recombination proteins [BR:
mes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Meso_0909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABG62306
UniProt:
Q11JW9
LinkDB
All DBs
Position
complement(1006874..1007731)
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AA seq
285 aa
AA seq
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MTSTTPLDFAGIRELLAFYSEAGADEALWEEAQDRFAEAKASAQTFSETVRPAQSDAAAP
QPENRATQPKPAPISAQPAAVPDEAQAAHAREVARQARTLDELKEILAGFEGCNLRLTAK
NLVFADGNPQADLMLVGEAPGRDEDLQGLPFVGRSGQLLNRMLAAIGRDRSTAYIANVIP
WRPPGNRDPSPLETEICRPFIERHIELVAPKLLVTLGNPSTKLLLGTQTGIMRLRGTWSV
HRTAGGLEIPTMPTLHPAYLLRNPAHKKLAWRDFLAVKMRLANSE
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgacgacgcccctcgacttcgccgggatacgtgaactgcttgccttttattca
gaggccggggcggacgaggcgctgtgggaggaagcgcaggatcgtttcgccgaggcgaag
gcgagcgcgcaaaccttttcggagactgtccgtcccgctcaatcggatgccgcggcaccg
cagccggaaaaccgtgcaactcagccgaagccagccccgatctccgcgcaaccggcagcc
gttccggacgaggcacaggccgcgcatgcccgcgaggtggcgcggcaggcacggacactc
gatgagttgaaggaaatccttgcgggattcgagggctgcaatctgcgcctcaccgcgaaa
aacctcgtcttcgccgacggcaacccgcaagccgaccttatgctggtgggagaggcgccg
ggacgggacgaggatctgcaaggcttgcccttcgtcggacgctcgggccagttgctcaat
cgtatgctggcggcaatcggccgggaccggtcgacggcctatatcgcaaatgtcattcca
tggcggccgcccggcaatcgtgacccctcgccgctcgaaaccgaaatctgtcgtcccttc
atagaacggcatatcgagctggttgcgccaaagctgctggttacgctgggaaatccgtcg
acgaagctccttcttggaacgcaaacggggatcatgcggctcaggggcacatggtccgtc
caccgcacggcgggcgggctggaaatacccacgatgccgaccttgcatccggcctatctg
ctgcgaaatcccgcacacaagaagctcgcctggcgcgacttcctggcggtgaagatgaga
ttagcgaacagcgaataa
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