Chelativorans sp. BNC1: Meso_0943
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Entry
Meso_0943 CDS
T00374
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mes
Chelativorans sp. BNC1
Pathway
mes03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Meso_0943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mes03400
]
Meso_0943
Enzymes [BR:
mes01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Meso_0943
DNA repair and recombination proteins [BR:
mes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Meso_0943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABG62340
UniProt:
Q11JT5
LinkDB
All DBs
Position
complement(1040815..1041477)
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AA seq
220 aa
AA seq
DB search
MSFPLAAGDPPRDCPLCPRLHSFIAGWREKEPEWFNAPVHTFLPTGGEQAVRLLIVGLAP
GLRGANRTGRPFTGDYAGMLLYGTLIRFGFASGRFEARPDDGLSLTDVAITNAVRCVPPE
NKPETSEIRTCRDYFLTPTIKRFPNLKGIVTLGKIAHDSTVRALGHRVSAIPFIHGAEEQ
AGDLRIFSSYHCSRYNTNTGVLTEEMFVEVFRRAREFLSQ
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcccccttgcggctggagatccgccgcgcgattgcccgctgtgtccacgtctt
catagtttcatcgccggctggcgcgagaaggagccggagtggttcaacgcgcccgttcac
acttttcttccaaccggcggcgagcaggctgtcaggcttctgatcgtcggccttgcgccg
ggtttgcgtggcgcaaaccggaccgggcgtcccttcaccggtgattatgcaggcatgctc
ctctatggaacgctcattcgcttcggattcgcgagcggccggttcgaggcccggccggac
gacgggctgagcctcacggacgtagccatcaccaatgccgtccgctgcgtgccgcccgaa
aacaagccggagaccagcgaaatccgcacctgccgggattatttcctgacaccgacgatc
aaacgctttccgaacctcaagggcatcgtgacgctcggtaaaatcgcgcatgattccacc
gtgcgggcgctcggccatcgcgtgagcgccattcccttcatccacggagccgaggaacag
gccggagatctgcgcattttttccagctatcactgctcgcgctacaacacgaacaccggc
gtcttgaccgaagagatgttcgtggaggtgtttcggagagcgagggagtttttaagccag
taa
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