Chelativorans sp. BNC1: Meso_1354
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Entry
Meso_1354 CDS
T00374
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mes
Chelativorans sp. BNC1
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mes03032
]
Meso_1354
03400 DNA repair and recombination proteins [BR:
mes03400
]
Meso_1354
Enzymes [BR:
mes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Meso_1354
DNA replication proteins [BR:
mes03032
]
Prokaryotic type
DNA Topoisomerases
Meso_1354
DNA repair and recombination proteins [BR:
mes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Meso_1354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
ABG62750
UniProt:
Q11IM5
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All DBs
Position
complement(1446096..1448645)
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AA seq
849 aa
AA seq
DB search
MDVVVVESPAKAKTINKYLGKDYKVLASFGHVRDLPAKDGSVRPEEDFAMSWEVDSPSAK
RLADIAKAVKDADGLILATDPDREGEAISWHVLEVLRQKRALKDKPVRRVVFNAITKKAI
LDAMASPREVDASLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDL
EAEIERFVREDYWQIAALLDTPRGDSFEARLTTLDGKRLQKLDIKSQEEADSIKALLDGA
AYRVLSVEAKPTRRNPGPPFTTSTLQQAASSRLSFSASRTMQVAQRLYEGVEIGGETTGL
ITYMRTDGVQMAPEAIEAARSAVSNTFGPRYLPEKPRHYSSKAKNAQEAHEAIRPTDFSR
TPDEVRKYLDSDQARLYEMIWKRAIASQMEAAEIERTTVEIEASGAGRAAGLRAVGSVVR
FDGFLAAYAEVKDEDSQDEEDRRLPEINSGEALKRNSVNVTKHTTEPPPRYSEASLIKKL
EELGIGRPSTYAAILKTLDDRGYVSNERRKLVPQAKGRIVTAFLENFFRRYVEYDFTADL
EEKLDEISDGKLSWKQVLRDFWKDFSAAVGDIKELRVTDVLDALNEELAPLVFPTREDGG
DPRICPKCGAGKLSLKLGRYGAFVGCSNYPECDYTRQLGENPAENGEAEAGLNGNKVLGT
DPFTGEEITLRSGRFGPYVQRGEGKDAKRAGLPKGWTPEDLDHEKAIALLSLPRDVGKHP
ETGKMISAGIGRYGPFLLHDGTYANLETVEDVFSVGLNRAVSLLAEKQAKTNGARAKPAA
LKELGEHPDGGVITVRDGRFGPYVNVGKVNATLPKGKDPMSLTREEALELLAAKAGKTGK
KPAKSKARS
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgtcgtcgtcgaatcgcctgcaaaggcgaaaactatcaacaaatatctgggg
aaggattacaaggtcctggcttccttcggccatgtccgcgatctcccggctaaggatggc
tccgtccgcccggaagaagacttcgccatgtcctgggaggtcgacagcccctcggccaag
aggcttgccgacattgcaaaggcggtcaaggacgccgacggcctgatcctcgccaccgac
cccgaccgcgaaggcgaagccatctcctggcatgttctggaagttctgcgccagaagcgg
gcgctcaaggacaagccggtccgccgcgtggtcttcaacgccatcaccaagaaagcgatc
ctcgacgcgatggcctccccgcgcgaggtcgacgcttcgctggtagacgcctatctcgcc
cgtcgcgcgctcgattacctcgtgggcttcacgctttctccggtcctctggcgcaagctg
ccgggcgcccgctcggccggccgcgtccagtccgtggcgctgcgcctcgtttgcgacctc
gaggcggagatcgagcgcttcgtgcgcgaggattactggcagatcgccgcccttctcgac
acgccgcgtggcgatagcttcgaggcccggcttaccacgctggacggcaagaggctgcag
aagctcgacatcaaaagtcaggaagaagcggactcgatcaaggcgctgctcgacggtgcg
gcctatcgggtgctttcggtcgaggcgaagccgacgcgccgcaaccctggcccgccgttc
acaacatccacgctgcagcaggccgcctcctcacggctgagcttttctgcctcgcgcacc
atgcaggtcgcccagcggctctatgaaggcgtcgagatcggcggggaaaccaccggcctc
atcacctatatgcgtacggatggggtgcagatggcgcccgaggccatcgaagcggcccgt
tccgccgtatccaacactttcggcccgcgatacctgcccgaaaagccgcgccattattcg
agcaaggccaagaacgcgcaggaagcgcacgaggcgatccgcccgaccgacttctcccgc
acgccggacgaggtgcgcaaatacctcgattccgaccaggccaggctttacgagatgatc
tggaagcgcgccatcgccagccagatggaggcggcggagatcgagcggaccactgtcgag
atcgaggcttcgggcgctggccgcgcggcgggactacgggcggtgggctccgtcgtccgc
tttgacggctttcttgcggcctatgccgaggtgaaggacgaggactcccaggacgaggag
gaccgtcgccttccggagatcaacagcggcgaggcgctgaagcgcaactcggtcaatgtc
accaagcacacaaccgagccgccgccgcgctattcggaagcttcgcttatcaagaagctc
gaggaactcggcatcggccggccctccacctatgcggctatcctgaagacgctggacgat
cgcggctatgtctccaatgagaggcgcaagctcgtaccgcaggccaagggccgtatcgtt
acggctttccttgagaacttcttccgccgttatgtggaatatgatttcacggccgacctt
gaggaaaagctggatgaaatctcggacggtaagctttcgtggaaacaggtgttgcgcgat
ttctggaaggacttttccgccgccgtcggggatatcaaggagctgcgcgttaccgatgtg
ctcgacgccctgaacgaggaactggcgccgctcgtctttccgacgcgtgaggatggtggc
gatccgcgcatctgccccaaatgcggagccggcaagctttcactgaagcttggacgatac
ggtgcctttgtcggctgttccaactacccggaatgcgactatacgcgccagcttggcgag
aacccggcggaaaatggcgaggcggaagcaggcctcaatgggaacaaggtgctgggcacc
gatcccttcaccggcgaagagatcacgctgcggtccggccgcttcgggccttacgtccaa
aggggcgaagggaaagacgccaagcgagcgggcctgcccaaaggctggacgcctgaagat
ctcgaccatgagaaggccatcgccctgctttcactgccgcgggatgtcggcaagcatccg
gaaaccggcaagatgatttccgccggcatcggccgctatgggcctttcctgctgcatgac
ggtacatatgcgaatctggagacggtcgaagatgtgttctcggtcggcctcaaccgcgct
gtttcgctgctggccgaaaagcaggcgaagaccaacggcgcccgcgcaaaaccggccgct
ttgaaggagctcggggaacatccggacggtggagtgattaccgtgcgtgacggccgcttc
gggccctatgtcaatgtcggcaaggtgaacgctactttgcccaagggcaaggatccgatg
tctttgacccgcgaggaggcgctggaactcctcgctgccaaggcgggaaagacgggcaag
aagccggcgaaaagcaaggcgaggagctga
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