Chelativorans sp. BNC1: Meso_1465
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Entry
Meso_1465 CDS
T00374
Name
(GenBank) RNA polymerase, sigma 38 subunit, RpoS
KO
K03086
RNA polymerase primary sigma factor
Organism
mes
Chelativorans sp. BNC1
Pathway
mes02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Meso_1465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mes03021
]
Meso_1465
Transcription machinery [BR:
mes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Meso_1465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
COG2p_C
Motif
Other DBs
NCBI-ProteinID:
ABG62861
UniProt:
Q11IB4
LinkDB
All DBs
Position
1564810..1566816
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AA seq
668 aa
AA seq
DB search
MATKEKEEVEIERDGTDGPLLDLSDDAVKKMIKLAKKRGYVTMDELNAVLPSGEVSSEQI
EDTMAMLSDMGINVVEDEEAGEEAEADSAPEEESGELAETGSAVATVAKKEPTDRTDDPV
RMYLREMGSVELLSREGEIAIAKRIEAGRETMIAGLCESPLTFQALIIWREELNDGKILL
REIIDLEATYAGPEGKQAPVIARPEDVARPAPEEKLMRRARDDDDITNVGGESRPEEDDE
EEDETNLSLAAMEAELKPGFMTTLDFIADTYSKLRKLQDQEVESRLGDSDKLSAGQERRS
KELKDELIKAVKSLSLNNQRIETLVEQLYDINKRLVQNELKLFRLAESYGVRREDFLKAY
QGSELDPNWGSTVAVLPQPGWRDFVKHEADTIEALRSEIQNLAQETGISIGEFRRIVNQV
QKGEREAAIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGY
KFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAE
KLAMPLEKVRKVLKIAKEPISLETPVGDEEDSHLGDFIEDKSAILPIDAAIQANLRETTT
RVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSR
KLRSFLDS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaaggaaaaggaagaggtcgagatcgaacgcgacggcaccgatgggccgctg
ctcgacctttccgacgacgcagtcaagaaaatgatcaagctcgcgaagaagcgcggctat
gtgaccatggacgagctgaatgcggtgctgccttccggtgaggtgagttccgagcagatc
gaggacacgatggccatgctttcggacatgggcatcaatgtcgtcgaggacgaggaggcg
ggcgaggaagccgaggctgacagcgcgcccgaagaggaaagcggtgagctggccgagacc
ggcagcgccgttgccaccgttgccaagaaagagccgaccgaccgcaccgacgaccccgtg
cgcatgtatctgcgcgagatgggttcggtggagctgctgtcgcgcgaaggcgaaatcgcc
atcgccaagcgcatcgaggccggccgcgagaccatgatcgccgggctttgcgaaagcccg
ctgacgttccaggcgctcatcatctggcgcgaagagcttaacgacggaaagatcctgctg
cgcgagatcatcgatcttgaggcgacctatgccggccccgagggcaagcaggcgccggtg
atcgcgcggccggaagatgtcgccaggcccgcgcccgaagagaagctgatgcggcgggcg
cgcgatgacgacgacattaccaatgtcggcggagagtcgcggcccgaggaagacgacgag
gaggaggacgagacgaacctctccctcgctgccatggaggccgagctcaagcccggcttc
atgacgacgctcgacttcatcgccgacacttattccaagctgcgcaagctgcaggaccag
gaggtggagagccgcctgggcgattccgacaagctttcggctggtcaggagcgccggtcc
aaagagctgaaggacgagctcatcaaggcggtgaagtcgctctcgctcaacaaccagcgc
atcgagacgctggtcgagcagctttacgatatcaataagcgcctggtgcagaacgagctg
aagctgttccggcttgccgagagttatggcgtgaggcgcgaggatttcctcaaggcctat
cagggttccgagcttgacccgaactggggttccacggtggccgtcctgccgcagcccggt
tggagggacttcgtcaagcacgaagccgacacgatcgaggcccttcgctccgagatccag
aatcttgcgcaggaaaccggtatttcgattggcgagttccgccgcatcgtcaatcaggtt
caaaagggcgagcgcgaggcggctatcgccaagaaggagatggtggaggccaatctgcgc
ctggtcatctccatcgccaaaaaatacaccaaccgtggcctgcagttccttgacctgatc
caggaaggcaatatcggcctcatgaaggccgtggacaagttcgagtatcgccgcggctat
aagttctcgacctatgccacctggtggatcaggcaggcgatcacccgttcgatcgccgat
caggcgcggacgatccgcatccctgtgcatatgatcgagacgatcaacaagatcgtgcgc
acctcgcgccagatgctgcatgagatcggccgggagccgacgccggaagaactcgccgaa
aagctcgcaatgccgcttgagaaggtgcgcaaggttctcaagatcgccaaggagccgatc
agcctcgaaacgcctgtgggcgatgaggaggattcgcatctcggcgatttcatcgaagac
aagagtgcgatcctgccgatcgacgcggcaatccaggcgaaccttcgcgagacgacgacg
cgcgttcttgcttcgctcactccgcgcgaggaacgcgtgctccgcatgcgcttcggcatc
ggaatgaacaccgatcacacgcttgaggaggtgggccagcaattctcggtcacacgcgag
cgcattcgccagatcgaggcgaaggcgctgcgcaagctcaagcatccgagccgcagtcgc
aagctgcgcagcttcctggacagctga
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