Chelativorans sp. BNC1: Meso_1988
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Entry
Meso_1988 CDS
T00374
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mes
Chelativorans sp. BNC1
Pathway
mes03420
Nucleotide excision repair
mes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Meso_1988
03430 Mismatch repair
Meso_1988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mes03400
]
Meso_1988
Enzymes [BR:
mes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Meso_1988
DNA repair and recombination proteins [BR:
mes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Meso_1988
MMR (mismatch excision repair)
Other MMR factors
Meso_1988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
DUF3553
DUF3638
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABG63381
UniProt:
Q11GU4
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All DBs
Position
2130253..2132883
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AA seq
876 aa
AA seq
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MPGFPDDLPFFGDDEAPHPAPREGGIAARAMAARQAQAPRYLEGLNPEQRLAVETTEGPV
LVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTNKAAREMKTRIGVLVGQAIEGM
PWLGTFHSIGVKLLRRHAELAGLTSSFTILDTDDQVRLLKQLIQAEALDDKRWPARQLAM
MIDGWKNKGLGPADIPEGDARAFGNGKGRALYAAYQQRLKTLNATDFGDLLLHPIRIFRE
HPDVLREYHAKFKYILVDEYQDTNTAQYMWLRLLAQRPGSPGTGGLPAEGRARGHALGDV
SQAHAAGGPGASPGQRPGGASANKVNICCVGDDDQSIYGWRGAEVDNILRFEKDFPGATV
IRLERNYRSTAHILGAASHLIAHNEGRLGKTLFTEHSDPDAPRVKVHAAWDSEEEARALG
EEIEALQAKGHALNDMAILVRASFQMREFEDRFVTLGLSYRVIGGPRFYERQEIRDALAY
FRVVAQGADDLAFERIVNVPKRGLGESAVRQIHDVARMRGVPLLQAARDLVGTEELKPKP
RASLRNLVESFERWQGLLDRTRHIELAETILEESGYTDMWKNDRSAEAPGRLENLKELIR
SMEEYESLRAFLEHVALVMDAERDEELDAVSLMTLHSAKGLEFDTVFLPGWEEGLFPHQR
SLDEGGRSGLEEERRLAYVGVTRAKKNLHIWFTSNRRIHGLWQSTIPSRFLDELPEKHVE
VTDDGGSFGGYGRPIADRQPGRPNPYGSSRFDNMGEVFSNSYATPGWQRAQKNRTEATAR
NWGSRSGHQVERIGYGEPDSGYGLGKGSVKGRTIEGELVAKSVSDGPSAFKVGDRVFHLK
FGNGNVAAVDGNKLTVDFDKAGQKRVLDGFVERLPH
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgccaggttttccagacgatctgcctttcttcggcgatgacgaagcaccccaccccgct
ccgcgcgagggcggcatcgccgcgcgcgccatggccgcgcgccaggctcaggccccccgc
tacctcgaagggctcaacccggaacagcgccttgccgtggaaaccacagagggtccggtt
ctggtgctcgcgggcgcgggcaccggcaagacccgcgtcctgaccacacgcatcgcccac
atcctcgcgacgggacgcgcctacccgtcgcaaattctcgccgtcaccttcaccaacaag
gccgcgcgcgaaatgaagacgcgaatcggcgttctcgtgggccaggcgatcgagggcatg
ccgtggctgggcacgttccactccatcggggtaaagctgctgcgccgccacgccgaactt
gcgggcctcacctcctctttcaccattctcgatacggatgatcaggtccggcttttaaag
cagctcatccaggccgaggcgctggacgacaagcgctggccggcgcggcagctggccatg
atgatcgacgggtggaagaacaagggtctcggccccgccgatataccggagggggatgcc
cgggccttcggcaacggcaaggggcgcgcgctctatgccgcctatcagcagcgcctgaaa
acgctcaatgccaccgatttcggcgatctcctgctgcacccgatccggatcttccgcgaa
cacccggatgtgcttcgcgaatatcacgccaaattcaaatacatcctggttgatgagtat
caggatacgaacaccgcccaatatatgtggcttcgtcttctcgcacagcggcccggcagc
ccaggcacgggcggtcttccagccgaaggcagagcgcgcggccacgcactgggcgacgtt
tcgcaagcacacgcggccggcggccccggagccagtccggggcagcggccgggcggcgcg
agcgcaaacaaggtcaatatctgctgcgtgggcgacgacgatcagtcgatttacggctgg
cgcggcgcggaagtggacaacatccttcgtttcgagaaggattttccgggcgcgacggtg
atccggctggagcgcaactatcgctcgaccgcgcatattctgggagccgcttcccacctc
atcgcccacaatgagggccggttaggcaagacgctcttcaccgagcactccgatcccgac
gcaccgagggtgaaggtgcatgccgcttgggattccgaggaggaggcgcgtgctctcggt
gaggagatcgaggctttgcaagccaagggtcatgctctgaacgacatggcaattcttgta
cgggcctcatttcagatgcgcgagttcgaggaccggttcgttacacttggcctgagctac
agggtcatcggcggcccccgcttctacgagcggcaggaaatccgcgacgcgctcgcctat
ttccgcgtcgtcgctcaaggcgctgacgatcttgctttcgagcgcatcgtcaacgtgccg
aaacgaggcttgggcgaatccgcggtgcgtcagattcacgacgtggcgcgcatgcgcggc
gtgcccctcctccaagcggcgcgagacttggtggggacggaggaactgaagccgaagccg
cgagcctccctgcgcaatctggtggaaagcttcgagcgctggcagggccttctcgaccgc
acgcggcacatcgagctcgcagagacgattctcgaggaatcgggctacaccgacatgtgg
aagaacgaccgctcggccgaggcgccgggcaggctggaaaacctcaaggagctgatccgc
tccatggaggaatatgagagcctgcgcgcctttttggagcatgtggcgctggtgatggat
gccgagcgcgacgaggaactcgacgccgtgagcctaatgacgctgcattcggccaaaggt
ctggaattcgatacggtctttctgccgggttgggaggaaggtctctttccgcatcaaaga
tccctggatgaaggcgggcgatcggggctcgaagaggaacgccgccttgcttatgtcggc
gtcacccgggcgaagaagaacctgcacatctggtttacatccaaccgccgcattcacggg
ctttggcagtccacgattccctcacgcttcctggatgaactgccggaaaagcatgtggag
gttacggatgacggcggaagcttcgggggctatgggcgtcccattgcggaccggcagccg
ggccggccaaacccctacggctcatcgcgcttcgacaatatgggcgaggtgttctccaac
agctacgccacgccgggctggcagcgcgcccagaaaaaccgcacggaagcaaccgcgcga
aactggggatcgcgctcaggccatcaggtggaacgtatcggctatggcgagccggactcc
ggctacggtcttggcaaaggctcggtcaagggccggaccatcgagggtgagcttgtcgcg
aaatccgtttctgatggtccgtcggccttcaaggtcggcgatcgggtattccacctgaaa
ttcggcaacggcaacgttgccgcggtggacggaaacaagctcaccgtcgatttcgacaaa
gcgggacagaagcgcgtcctcgatggcttcgtggagcgcctcccgcattga
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