Chelativorans sp. BNC1: Meso_2368
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Entry
Meso_2368 CDS
T00374
Name
(GenBank) chaperonin Cpn60/TCP-1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mes
Chelativorans sp. BNC1
Pathway
mes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Meso_2368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mes03019
]
Meso_2368
03110 Chaperones and folding catalysts [BR:
mes03110
]
Meso_2368
03029 Mitochondrial biogenesis [BR:
mes03029
]
Meso_2368
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mes04147
]
Meso_2368
Enzymes [BR:
mes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Meso_2368
Messenger RNA biogenesis [BR:
mes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Meso_2368
Chaperones and folding catalysts [BR:
mes03110
]
Heat shock proteins
HSP60 / Chaperonin
Meso_2368
Mitochondrial biogenesis [BR:
mes03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Meso_2368
Exosome [BR:
mes04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Meso_2368
Exosomal proteins of other body fluids (saliva and urine)
Meso_2368
Exosomal proteins of breast cancer cells
Meso_2368
Exosomal proteins of colorectal cancer cells
Meso_2368
Exosomal proteins of bladder cancer cells
Meso_2368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABG63754
UniProt:
Q11FS1
LinkDB
All DBs
Position
complement(2520405..2521928)
Genome browser
AA seq
507 aa
AA seq
DB search
MRRIMASDAALVARVIASSMGPGGCHVAIERSYGNPVARDAVSVVRALAGGPDSISPGQR
LLREAVMEVHQTWGDGGSTVAIVVSSLLRSITRLCAGQIDRLELGQGVRTALAQARDRLI
ADSRPVVEDRELLCLTTTAAQDKALGGLAMQALRRAGMEGQVSVQVSPEGGDRLEADHGF
RVPPLAAPLGFSKGLALNQLERPFVLLLDETLPGFDPLGPLLDKVLRTERPLLIVCQGGA
PAAIQAINQNRRQGGMATALVTAPPRPDQREELLEDLAVLCGGLVTGSHRGVPLASVDID
MLGSLDEAIFGAADTVLKPDHTSGISKRLEILRRRRESAPPQEVEALRQRIARLSGHLVS
LMIGGATGLEATDRRDRCESALKSGRAGLVGGYVAGGGAALARAAAAITVSPEATVGAMA
GARIVQEALRQPCSTIARNAGHSSPAAVAALLAEADPDICFDLRTSRFGNMLDLGLCDAA
APLVHGLTVAQSITRSFLDAEILLIRR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgcatcatggcgtccgatgcagcgctcgtggcgcgtgtcatcgcctcgagcatg
gggccgggaggctgtcatgtcgcaatcgagcgcagctacggcaatccggtcgcacgcgac
gccgtcagcgtggttcgcgcactggccggcggccccgacagcatctctcccggtcagcgg
cttctgcgtgaggccgtcatggaggtccatcagacctggggcgacggcggaagcacggtg
gcgattgtcgtttcgtcgctcctgcggagcatcaccaggctgtgcgctggccaaattgat
cgccttgaactggggcagggggttcgaaccgcgctcgcgcaggcccgcgatcgcttgatc
gcggacagccgcccggtggtcgaggaccgcgaactcctttgtctcaccaccactgctgca
caggacaaggcgctgggcggcctggcgatgcaggcattgcggcgagccgggatggagggc
caggtcagcgtgcaggtctcgccggaaggcggcgaccggctcgaagccgaccatggcttt
cgcgttccgccgcttgcggcgccgcttgggttcagcaaagggctggcgctgaaccagctg
gaacgccctttcgtgctgctgctggacgaaacactgcccggcttcgacccgcttggtcct
cttctcgacaaggttctacggacggaacgccctttgctgatcgtatgccagggcggcgcc
cccgcagcaattcaggcgatcaaccagaaccgaaggcaaggtggcatggccaccgccctc
gtcacagcgcctccgcgtcccgaccagcgggaggaactactggaggatctggcggtgctg
tgcggcgggttggtcactggatcccaccgcggagtgccgctggcatccgtcgatattgac
atgctgggttcgctcgacgaagccatcttcggtgcggcggataccgttctcaagccagac
cacacatcagggatctcgaaacgtctcgagatcctgcgccggaggcgggaatcggcaccc
ccgcaggaggtcgaggcgctgcgtcaacgcattgcccggctgagcggccacctggtatct
ctgatgatcgggggtgcgacggggctggaggcgaccgacaggcgcgaccgttgcgaaagc
gcgctcaagtcaggccgtgccgggctggtcggcggctacgtggcgggcggcggcgcggcg
ctggcgcgcgcggcggcggcgatcaccgtttcgcccgaggctacggtgggcgcgatggca
ggcgcgcgcattgtgcaggaggctctgcggcagccctgctcgaccatcgctcgcaatgca
ggccattcgtcgccggctgcggttgcggctcttttggctgaagccgatcccgacatctgc
ttcgacctgcgcacatctcggtttggaaacatgctggacttgggcctgtgcgacgcggcg
gcgcccctggtgcatgggttgacggtagcccaatcgatcacacggagcttcctggatgct
gaaatcctgcttatccggcgctga
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