Chelativorans sp. BNC1: Meso_2840
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Entry
Meso_2840 CDS
T00374
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mes
Chelativorans sp. BNC1
Pathway
mes03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Meso_2840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mes03400
]
Meso_2840
Enzymes [BR:
mes01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Meso_2840
DNA repair and recombination proteins [BR:
mes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Meso_2840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABG64216
UniProt:
Q11EF9
LinkDB
All DBs
Position
complement(3089375..3089995)
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AA seq
206 aa
AA seq
DB search
MDFPESKHVKLKTLDAVREDAQDCTRCDLYKNATQTVFGEGGNQARVVFVGEQPGDKEDV
EGRPFVGPAGRMFDAILEEVGIDRKKTYVTNAVKHFKFELRGKRRIHSKPNAGEIRACRW
WLDQELTLIQPDVAVALGATAARALVGKAVPVMTLRGTITESAEGVPVFITVHPSSLLRV
PDEMDRRRARELFAEDMRKVKALMKG
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggattttccggagtccaaacacgtaaagctcaagacgctcgatgcggtgcgcgaggac
gcgcaggattgtacgcgttgcgacctctacaagaatgccacgcagactgtgttcggcgag
ggcggcaaccaggcgcgcgtggtatttgtcggcgagcagccaggcgataaggaggacgtg
gagggccggcccttcgtggggccggcaggccggatgttcgatgccattctggaggaagtg
ggcatcgaccggaagaagacctatgtcaccaatgcggtgaagcatttcaagttcgagcta
cggggcaagcgccgcattcattccaagccgaatgctggcgaaatccgcgcctgccgctgg
tggctcgaccaggaattgacactgatccagccggatgtggcggttgctcttggcgccaca
gcagcgcgggcgctggtgggcaaggcggtgccggttatgacgctgcgcggcacgatcacc
gaaagcgcggagggcgtgcccgtcttcatcacggttcacccttcctcccttctgcgcgtt
ccggacgagatggacaggcgccgcgcgcgcgaactctttgccgaggacatgcgcaaggtg
aaagcgctgatgaaggggtaa
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