Chelativorans sp. BNC1: Meso_3176
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Entry
Meso_3176 CDS
T00374
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mes
Chelativorans sp. BNC1
Pathway
mes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Meso_3176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mes03400
]
Meso_3176
Enzymes [BR:
mes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Meso_3176
DNA repair and recombination proteins [BR:
mes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Meso_3176
RecFOR pathway proteins
Meso_3176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_16
AAA_14
AAA_22
AAA_2
nSTAND3
Rad17
DUF815
AAA_17
AAA_18
RNA_helicase
AAA_33
TsaE
AAA_28
NTPase_1
NB-ARC
AAA_24
ABC_tran
Bac_DnaA
IstB_IS21
AAA_7
Cytidylate_kin
NACHT
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
ABG64548
UniProt:
Q11DH7
LinkDB
All DBs
Position
complement(3448562..3449599)
Genome browser
AA seq
345 aa
AA seq
DB search
MSEPDRIVSAVQRGEDIDTTMRPQSLDEFVGQKTARANLKVFIEAARSRGEALDHVLFVG
PPGLGKTTLAQIMARELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNPAV
EEILYPAMEDYQLDLIIGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIPIRLE
FYTVDELQAIVTRGARIMGMPLAEDGAEEIARRARGTPRIAGRLLRRVRDFAYVAGAENV
TRQIADAALSRLEVDALGLDQLDRRYLHMIVENFGGGPVGIETIAAALSEPRDAIEDIIE
PYLIQQGFIQRTPRGRVLAAKAWRHLGLNPPKELAQSQINLFEEE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagccggaccgcatcgtttctgctgtccagcgcggcgaggatatcgacacgacg
atgcgtccgcagtcgctggacgaatttgtcggccagaagacggcacgcgccaatctcaaa
gtgtttattgaggcggcgcgctcgcggggcgaagcgctggatcacgtgctgttcgtcggc
ccaccgggcctcggcaagaccacgcttgcccagatcatggcgcgagagctcggcgtcaat
ttccggtccacctccggcccggttatcgccaaggcaggtgaccttgcggcgcttctcacc
aatcttgaggagcgcgacgtgctcttcatcgacgagatccaccggctcaatcctgccgtg
gaagaaatcctctatcccgcgatggaggactaccagctcgatctcatcataggcgagggc
cccgcggcgcgctcggtcaagatcgaccttgccaaattcacgctcgttgccgcgaccacc
cgccttgggctcttgaccacgccgctgcgtgaccggttcggcatcccgatcaggctcgaa
ttctacacggtcgacgaattgcaggcgatcgtcacgcgaggcgcacgcattatgggcatg
ccgcttgccgaagacggcgcggaggagatcgcacgccgcgcccgaggaacgccccgaatc
gccggccgccttctgcgccgggtgcgcgatttcgcctatgtggcgggcgcggaaaacgtg
acgcggcagatcgccgacgcggcgctttcaaggcttgaggtggatgcgctcggccttgat
cagcttgaccggcgctatctccatatgatcgtggagaatttcggtggcggccctgtgggg
atcgagacaatcgcggctgcgctttccgagccgcgcgacgccatcgaagacattatcgag
ccctatctcatccagcagggcttcattcagcgcacaccgcgcggccgggtgcttgcggcc
aaggcctggaggcatctcgggctgaacccgccgaaggagcttgcgcagtcgcagatcaat
ttattcgaggaggagtga
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