Chelativorans sp. BNC1: Meso_3349
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Entry
Meso_3349 CDS
T00374
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mes
Chelativorans sp. BNC1
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mes03016
]
Meso_3349
Enzymes [BR:
mes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Meso_3349
Transfer RNA biogenesis [BR:
mes03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Meso_3349
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
ABG64720
UniProt:
Q11D05
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All DBs
Position
complement(3619224..3619823)
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AA seq
199 aa
AA seq
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MPRLFTALEIPRDAALSLSLLRGGLPGARWIDVENYHLTLRFIGDVEGHVADEIANALDR
VRRPSFLLTLSGVGAFGQKKPHSVWAGVAASPDLQALQGEIERICQRLGLPAEQRKFTPH
VTLARLKNASPHEVASYLSARGNFAAMPFRVNRFVLMSSRDSVGGGPYVVEEAWPLLRTE
SARSASLSASASEASRIMR
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgacttttcaccgccctcgaaattccgcgcgatgcggctttatcgctctcgctc
ctgcgtggcggattgccgggagcccgctggatcgatgtcgagaattatcatctgacattg
cgcttcatcggggatgtggaaggccatgtggccgacgagatcgccaacgcgctggaccgg
gtgcgccggccctccttcctcctcactctttccggcgttggcgcattcggacagaagaag
ccgcattctgtctgggccggtgttgcggcatcgcctgatcttcaggcgctccagggagaa
atcgagcggatctgccaacgcctgggcctgccggccgagcaacggaagtttactccgcat
gtgaccttggcccggctcaagaacgcctccccacatgaggtcgcttcctatctgtcggcc
cgtggcaatttcgctgcgatgcccttccgggtaaaccgcttcgttttgatgtcctcacgg
gattccgtaggcggcgggccctatgtggtggaggaggcctggccgctgttgcgtaccgaa
agcgcgcggtcggcaagcttgtcggccagcgcttcggaagcttcgcggatcatgcggtaa
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