Chelativorans sp. BNC1: Meso_3380
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Entry
Meso_3380 CDS
T00374
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mes
Chelativorans sp. BNC1
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mes03021
]
Meso_3380
Transcription machinery [BR:
mes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Meso_3380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_3
HTH_31
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
ABG64751
UniProt:
Q11CX4
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Position
3654728..3655582
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AA seq
284 aa
AA seq
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MQEDVRRKLIKAAMKAPYLGREEEHELALQWKERQDQQALHRMIMAHMRLVIAMAGKFRN
FGLSMSDLIQEGHVGLLEAAARFDPEREVRFSTYATWWIRASMQDYILRNWSIVRGGTSS
AQKALFFNLRRLRMKLQKAGGTTPSEDVYREVAQALRVSESDVAMMDSRLAAADASLNAP
LRSDSDPTSERIDFLICDKPQPDELVREAIDGERKAQWLHQALGTLNGRELTIVRERRLS
EEGATLEALGASLGISKERVRQIESRALEKLRTALVKHHPELAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaagatgttcggcgaaagctgatcaaagccgccatgaaagcgccctatctcggg
cgcgaggaggagcacgaactcgctctccagtggaaggagcgacaggatcagcaggcgctc
caccgcatgatcatggcacatatgcggctcgtgatcgccatggcgggcaaattccgcaat
ttcggactttcgatgagcgacctcattcaggaagggcatgtgggtctcctggaggcggcg
gcgcgttttgatcctgagcgggaggtgcgtttttccacctacgcaacctggtggatccgc
gcctccatgcaggactatatcctgcgaaactggtccatcgtgcgcgggggtaccagctct
gcccaaaaggcactattcttcaatctgcggcgtttgcgcatgaagttgcagaaagcaggt
gggacgacaccgtcggaggacgtctaccgcgaagtggcccaggcactcagggtttccgaa
agcgacgtcgcaatgatggattcccggcttgccgctgcggacgcctcactgaacgcgcca
cttagaagcgacagcgatccaacctccgaacggatagatttcctcatatgcgacaaaccc
cagccggatgaactcgtgcgcgaggcgatcgacggcgagcgtaaggcgcaatggctgcac
caggcccttggcacgttgaacgggcgggagctcaccatcgtgcgcgaacgacggctgtcc
gaggaaggcgcgactttggaggctctgggtgcatcgctcggcatttccaaggaacgcgta
cgccagatcgaatcccgcgcacttgagaaactgcgcactgccctcgtaaagcaccatccg
gagcttgcagcctag
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