Chelativorans sp. BNC1: Meso_3667
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Entry
Meso_3667 CDS
T00374
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
mes
Chelativorans sp. BNC1
Pathway
mes02020
Two-component system
mes02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Meso_3667
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Meso_3667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mes03021
]
Meso_3667
Transcription machinery [BR:
mes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Meso_3667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
phiKZ_IP
Motif
Other DBs
NCBI-ProteinID:
ABG65035
UniProt:
Q11C40
LinkDB
All DBs
Position
complement(3956497..3957978)
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AA seq
493 aa
AA seq
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MALSTGIQLRQSQSLVMTPQLLQSIRLLQLTHIELELFISEEIERNPLLDLVDASEEVPA
SVLEERFASPDSAADIAERLDTSPEDLFPDDPDVRDTIGPDLMAQWRSAAGNGLVATGED
WNLEETTAAPATLRDHVREQIVLAFPDPVLKLIAEELLDGLDDAGYFTGDLNEIAERLAA
ETVLVERVLSICQTFDPPGLFARTLAECLALQLKARDRLDPAMQAMLSRLDLLSRRDFAS
LKKVCGVDEEDLVEMLAEIRSLDPKPGTAFSSAPAEPVLPDVIVRPSAGGAWAIELNPEV
LPRVLVNETYFTAVSTRAGKEEKAFLSECLQSANWLTRSLEQRARTILKVASEIVRQQDA
FFVNGVRHLRPLTLKMVADAIEMHESTISRVATNKYMMTPRGLFELRYFFTTAIAAADGG
DAHSAEAVRDRIRQLVEAEDPNEVLSDDTIVEVLRKDGIDIARRTIAKYREAMNIPSSVQ
RRREKRVLARAGA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcgctttcaaccggcatacagttgcggcagtcccaatcgctggtcatgacgccccag
ctgctgcagtctatccggctgctgcagctgacacatatcgagttggagctgttcatatcc
gaggagatcgagcgcaatccgctcctcgatcttgtcgatgcgagcgaggaggtgcccgca
agcgtccttgaggagagatttgcctcgccggacagcgccgcggatattgccgagcggctg
gacacctcgcccgaagatctgtttccagatgacccggacgtgcgggacacaatagggccg
gatctcatggcccagtggcgctccgccgccggaaatgggctcgtcgcgacgggcgaggat
tggaatctggaggagacgacggccgcgccggctaccttgcgcgaccatgttcgcgagcag
atcgttctcgcctttcccgatccggtcttgaagctgatcgccgaggagctgctggatgga
ctggacgatgccggctatttcacgggcgacctgaacgagatcgccgaacgcttggctgcc
gagacggtgctggtggagcgggtgctttcgatctgccagacctttgatccccccggcctg
ttcgcccgcacgcttgccgaatgccttgcgctgcaattgaaggcgcgggatcgtctggat
cctgccatgcaggcgatgctttcgcgtcttgatctgctttcaaggcgcgattttgcttct
ttgaagaaagtctgcggcgtggacgaggaggacctcgtggagatgctggcggaaatccgc
tcgctcgatcccaagcccggcacggccttctcgtcggcacccgccgaacctgtcctgccg
gatgtgatcgtgcggccctccgccgggggagcatgggcgatcgagctcaatccggaagtg
ctgccacgcgtgctcgttaacgagacatatttcacggccgtttccacgcgggccggcaaa
gaggagaaagcctttctttccgagtgccttcaaagtgccaactggctgactcgcagcctg
gagcagcgggcaaggaccatcctgaaagttgcctccgagatcgtgcgccagcaggatgcg
tttttcgtgaatggcgttcggcacctgcgtccgctgacgctgaaaatggtggctgatgcg
atcgaaatgcacgaatcgaccatcagccgcgtcgccaccaacaaatacatgatgacgcct
cgcggtctcttcgaactgcgctacttcttcacgactgccattgccgccgccgacggaggc
gatgcgcattcggcggaggcggtgcgtgaccggatccggcagcttgtggaggcggaagac
cccaacgaagtgctttccgacgatacgattgtcgaggttctgcgaaaggacggaattgat
atcgcccgcaggacgatagcaaaataccgggaggcgatgaacatcccgtcgtcggttcag
cgcaggcgcgagaagagggtgctcgcccgagccggcgcatga
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