Methanocaldococcus lauensis SG1: MLASG1_0661
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Entry
MLASG1_0661 CDS
T07808
Symbol
herA
Name
(GenBank) DNA double-strand break repair helicase HerA
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
mesa
Methanocaldococcus lauensis SG1
Brite
KEGG Orthology (KO) [BR:
mesa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesa03400
]
MLASG1_0661 (herA)
DNA repair and recombination proteins [BR:
mesa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MLASG1_0661 (herA)
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GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
TrwB_AAD_bind
RsgI_N
DUF1173
DUF4635
Prominin
ORC3_N
Motif
Other DBs
NCBI-ProteinID:
CAB3288434
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Position
I:complement(622742..624475)
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AA seq
577 aa
AA seq
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MNIIEDVVGIVKGEATVTNFKFSAHPDAELRFGEFVVAQNREDEWVIGNIRKLENINWLL
SGGKSTYYALQIDLEQYGDSIESNEEIIATVRILGKIKINGERVEVLPNRVPIPNGRKVY
RLSDDILKAIFNPGKGYIEIGNLLLRESVPIYLNADELVSRHFAILAVTGAGKSNTVSVM
ISQIVEKLRGTVVVLDPHGDYIKLKLPNTGKEYVKIIEAKIKPEEMDSEELADLIEIAKN
ATIQREFLAKAWETVKHENPNVGGREIIEKLMEKINEWIRNKKAEYWDEGKKDYFTEELK
PERVETLRGVVLRIRRFLRNYGTLLTSEDLISQIAPGKVNVIDLGHLDETQMKVVVGKLL
YAIFEARVDYEKARKKLERIKEELRESRVVRTSKLENEIKELEKTMKDIKSKSKALAEPI
LLIVEEAHIFAPQGENNDAVRILSRIAREGRKFGVGLGIVSQRPNKLNEDVLSQTNTKII
LRIVNPKDQDYVLKASEQLSSDLLSDIASLGKGEAVIVGQAISLPALVKIHNFKSMGGDY
GGEDIGVVSRWLNREVEEKKEKEIQKIYEDEGIGYDF
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaatattattgaggatgttgttggtatagtcaaaggagaggcaacagttacaaatttt
aaattttctgctcatccagacgctgaattacgatttggagaatttgttgtagctcaaaat
agagaggatgaatgggttattggcaatattagaaaacttgaaaatataaactggcttctc
agtggaggaaaaagcacatattatgctcttcaaatagatttagaacaatatggagatagt
attgaatccaatgaagaaatcatagctactgtaagaatccttggaaaaattaaaattaat
ggagaaagagttgaggttttgccaaatagagtgcctattcctaatggtagaaaggtttat
cgtttaagtgatgatattttaaaggcaatattcaatcccggaaaaggttatatagaaata
ggaaatctccttttgagagaaagtgttccaatttatctaaatgctgatgaactcgtttca
agacattttgcaattttagctgttactggggctggaaaatctaataccgtatctgtgatg
attagtcaaattgttgaaaaacttagagggactgttgtagttcttgaccctcatggagat
tatattaagttaaaacttccaaatactggaaaagaatatgtgaaaataattgaagccaaa
ataaaaccagaagaaatggatagtgaagaattagctgatttaattgaaattgccaaaaat
gcaacaattcagagagagtttttagccaaggcatgggaaactgttaaacatgaaaatcca
aatgttgggggaagagagattattgaaaaactcatggaaaaaataaatgagtggattaga
aacaaaaaagcagaatattgggatgagggaaagaaggattactttactgaagagcttaaa
cctgagagagttgaaactttaagaggcgtagttctaagaattagaagatttttaagaaac
tatggaactttattgacaagtgaagatttaatctctcagattgcgccgggtaaagtcaat
gttattgatttgggtcacttagatgagacccaaatgaaggttgttgttggtaagctgttg
tatgcaatatttgaggcaagggtagattatgaaaaagcaagaaagaaacttgaacgaata
aaagaagaattgagagaaagtagagtagttagaacttcaaaacttgaaaatgaaataaaa
gaacttgaaaaaactatgaaggatattaaaagtaagagtaaagcccttgctgagccaatc
cttcttattgtagaagaggcacatatctttgctccacaaggagaaaataacgatgctgta
agaattttaagtagaattgcgagagaaggtagaaaatttggagtaggattgggaatagtt
tcacaaagaccaaataaattgaatgaagatgttttaagtcaaacaaacacgaagataatt
ttaagaattgtaaatccaaaagatcaggattatgttctcaaggcgagtgagcaactgagt
tctgatttactctcagatatcgcctctcttggtaagggtgaggctgtaatagttggtcaa
gcaatttctcttccagctttggttaaaatacacaactttaaatctatgggtggggattac
ggtggtgaagatataggagttgtttcaagatggctcaatagagaggttgaagaaaaaaaa
gagaaggaaattcaaaaaatttatgaagatgaggggataggttatgacttttaa
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