Methanocaldococcus lauensis SG1: MLASG1_0981
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Entry
MLASG1_0981 CDS
T07808
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mesa
Methanocaldococcus lauensis SG1
Brite
KEGG Orthology (KO) [BR:
mesa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesa03032
]
MLASG1_0981 (topA)
03400 DNA repair and recombination proteins [BR:
mesa03400
]
MLASG1_0981 (topA)
Enzymes [BR:
mesa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MLASG1_0981 (topA)
DNA replication proteins [BR:
mesa03032
]
Prokaryotic type
DNA Topoisomerases
MLASG1_0981 (topA)
DNA repair and recombination proteins [BR:
mesa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MLASG1_0981 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Intein_splicing
Toprim
ADK_lid
DUF1272
DNA_ligase_ZBD
DmmA-like_C
Zn_ribbon_recom
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
CAB3289061
LinkDB
All DBs
Position
I:930669..933149
Genome browser
AA seq
826 aa
AA seq
DB search
MSVLIICEKPSVAKKIANALGKPKKKTIYNVPYYELERNGKKIIVASAVGHLFTLVEKNN
TKFGHYPVFNVKWAPASVEKGKKYVDNYIKALKKLSKEVDEIYIATDWDIEGELIGFHAL
KYCCGKTKAKRMRFSSLTKNEIIKAFENPDEIDYGLVDAGESRHIIDWYYGINLSRALMN
AIKAVNQWKTMSVGRVQGPALAFLTERELEIKKFVPKPYWVIEALLKDNLKVIHEKEKFW
DEKEAKNVYEKVKNEKFGKVVEIKRTVRKIKPLPPFDLGTLQREAYNYFKFSPKETQEIA
QSLYEKGLCLHPDTLILLPDGVKKIKDLDEEGNILCLNKDLKLAKSKYKLLKRTVKEKLI
KITLNDGTELIATKEHPILVYRDKLIFVPSGELKENEQVVTLSYGEVYIQKIKKIEEINY
EGEVYDLTVEKYHNFIANGVVVHNCSYPRTSSQKLPKDKNYLENILNTLKNHPIYGKWAK
DILNKGDLKPVDGKKEDPAHPAIHVVDIPKDEELSEKEKKIYDLIARRTLSAFWDNAERE
YSNIKININGEIFKLSGSRTLKEGWHEIYYFPKFDDCELPKLNKGDLIPIQKITITKKET
QPPKRYTVASIIKELEKRKLGTKATRAEIIEKLIKRGYVVDDGSLKVTDLGISVVETLKK
FCPEIIDEKMTRDLEEKLEKIQFRKIKKDEVLDEAEQKLRKILEEFKKKEKDVGMFLIKK
LDSNNTNSNTKENKENTAESKKVVGKCPKCGGDLILKKGKYGEFYGCSNYPKCKYTESIN
KEVIKKCPKCGGELIIREGKYGKFLGCSNYPKCKYTEKLNKKVDKT
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttttaattatttgtgaaaagccaagtgttgctaaaaaaatagccaatgctttg
ggaaaacctaagaaaaaaactatctataatgttccatactacgaattggaaagaaatgga
aaaaaaattattgttgcgagtgcagttgggcatttatttacgcttgttgaaaaaaacaat
actaaatttggacattatcctgtttttaatgtaaaatgggcgccagcaagtgttgaaaaa
ggaaaaaaatatgttgataactatataaaggcattaaaaaaactttctaaggaggtagat
gaaatatatatagcaacagattgggatattgagggagaattaataggttttcacgcattg
aaatactgttgtggtaagacaaaggctaagagaatgagattttcctcattaacaaaaaat
gaaattataaaagcgtttgaaaatcctgatgaaatagattatggtttagttgatgctgga
gagagtaggcatatcatagattggtattatggaataaacttatcaagggctttaatgaat
gctattaaggcagtaaatcaatggaaaacaatgagtgttggtagagttcaaggaccagca
ttagcttttttaactgagagagagttggaaattaaaaaatttgttccaaagccatactgg
gttattgaggcattattaaaggataatttaaaggtaatacatgaaaaagagaaattttgg
gacgaaaaagaagctaaaaatgtttatgaaaaagtaaaaaatgaaaagtttgggaaggtt
gtagagataaaaagaactgtgagaaagataaagccactccctccttttgacttaggaact
ttacagagagaggcatacaactattttaagttttctccaaaggaaacccaagaaattgcc
caaagtttgtatgaaaaaggtttatgtttgcatccagatacattaattttattacctgat
ggagttaagaaaattaaggatttggatgaagaaggaaatattttatgtttaaataaggat
ctaaaattagcaaaatcaaaatataaacttttaaaaagaacagtaaaagagaaactaata
aaaattaccttaaatgatggaacagaacttattgcaacaaaagagcatccaattttggtc
tatagggataagttaatatttgttccttctggagagttgaaagaaaatgaacaagtagta
acacttagttatggagaggtttatatccaaaaaattaaaaaaattgaagaaattaattat
gaaggagaggtttatgatttaacagttgaaaaataccacaactttatagccaatggtgta
gttgtgcataactgctcatacccaagaacatcttctcaaaaattaccaaaggataaaaac
tatttagagaatattttaaatactttaaagaatcatccaatttatggaaaatgggctaaa
gatattttaaataagggagatttaaagccagttgatggaaaaaaagaagacccagcacat
cctgcaatacatgttgtagatattccaaaagatgaagaattatcagaaaaagaaaaaaag
atttacgatttaattgcaagaagaacattaagtgccttttgggataatgcagagagggaa
tattcaaatataaaaattaacataaatggagagatttttaaactatctggttcaagaaca
ttaaaagaaggttggcatgaaatttattacttcccaaaatttgatgactgtgagttgcca
aagttaaataagggagatttaatacctattcaaaaaataactataactaaaaaagaaact
caaccacctaaaagatacactgttgcaagtataattaaggaattggagaagagaaagtta
ggaactaaggcaacgagggcagaaatcattgagaaattaataaaaagagggtatgttgtt
gatgatggctcattaaaagtaactgacttaggaatttcagtcgttgaaactttaaaaaag
ttctgtccagaaattattgacgaaaaaatgacgagagatttagaagagaagttagaaaaa
atacagtttagaaagattaaaaaagatgaagttttggatgaggcagaacaaaaattaagg
aaaattttagaagaatttaaaaagaaagaaaaagatgtaggaatgttccttataaaaaag
ttagattctaataatactaactcaaatacaaaagaaaataaagaaaatacagctgaaagt
aaaaaagttgttggaaaatgccctaaatgtggtggagatttaattttaaagaaaggcaaa
tatggtgaattttacggctgttctaattatcctaagtgcaaatatactgaatcaataaat
aaagaggttataaagaaatgtcctaaatgtggaggagagttaataattagagaaggaaag
tatggaaagtttttaggatgttcaaattatccaaagtgtaaatatacagaaaaattaaat
aaaaaggtggataaaacatga
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