Methanocaldococcus lauensis SG1: MLASG1_1150
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Entry
MLASG1_1150 CDS
T07808
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mesa
Methanocaldococcus lauensis SG1
Pathway
mesa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mesa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MLASG1_1150 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesa03021
]
MLASG1_1150 (rpoA)
Enzymes [BR:
mesa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MLASG1_1150 (rpoA)
Transcription machinery [BR:
mesa03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MLASG1_1150 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
DUF6980
DUF7479
Motif
Other DBs
NCBI-ProteinID:
CAB3289404
LinkDB
All DBs
Position
I:complement(1071791..1074460)
Genome browser
AA seq
889 aa
AA seq
DB search
MEKYEIPKELGEIMFGLLSPDYIRQMSVAKIITPDTYDEDGYPIEGGLMDPRLGVIDPGL
VCKTCGGRIGECPGHFGHIELAKPVIHIGFAKTIYNILKAVCPHCGRVAIPENKRREFLE
KMEKLERDGGNKWEVCDEVYKEASKVTICPYCGEVKYEIKYEKPTTYYRIEDKEEKVLTP
SDVREILEKIPDEDCILLGLNPETTRPEWMVLTVLPVPPVTVRPSITLETGERSEDDLTH
KLVDIIRINNRLEENIEGGAPNLIIEDLWNLLQYHINTYFDNEAPGIPPAKHRSGRPLKT
LAQRLKGKEGRFRYNLAGKRVNFSARTVISPDPCLSINEVGVPEVIAKELTVPEKVTKFN
IEKIKKLLKNGPNKHPGVNYVIRKMIGKDGKEHEFKVKITESNKDFWIENIREGDIVERH
LMDGDIVLYNRQPSLHRMSIMGHKVRVLPYRTFRHNLCVCPPYNADFDGDEMNLHVPQSE
ESRAEAESLMLVEKHILSPRFGGPIIGAIHDFISGAYILTSNYFTKDEATLILRSGGIKE
ELWEPDKIENGVPLYSGKKIFSKALPKGLNLRYKAKICRKCDVCKKENCEYDAYVVIKDG
ELVKGVIDKNGYGAEAGLILHTIVKEFGPEAGRKFLDSTTKMAIRAIMLRGFSTGIDDED
LPEDALKEIEKVLDEAEKKVKEIIEKYERGELDLLPGLDLEESREAYINNVLREARDKAG
QIAERYLGMDNHAVIMAVTGARGNILNITQMAACLGQQSVRGRRIFRGYRGRVLPHFEKG
SLDARSHGFVRSSYKKGLSPTEFFFHAMGGREGLVDQAVRTAQSGYMQRRLINALQDLKT
EFDGVVRDSRGIIIQFKYGEDGVDPMLADRGKAVNIDRIIDKIKMRYNK
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatacgaaattccaaaggaactcggagaaataatgtttggattattgtctcca
gattacattagacaaatgtcagttgctaaaataataaccccagatacatacgatgaagat
ggttatccaattgaaggaggattaatggatccaagattaggagttatcgatcccggttta
gtttgtaaaacttgtggaggaagaattggagaatgtcctggacattttggacatatagag
ttagccaaacccgttatccacataggatttgctaaaaccatatataatatattgaaggct
gtatgtcctcactgtggtagagtagcaattccagaaaataaaagaagagaattcttagaa
aaaatggaaaaattggagagagatggtggaaataagtgggaagtttgtgatgaagtttat
aaggaggcttcaaaggttacaatttgtccatactgtggagaagttaaatatgagataaaa
tatgaaaaacctactacttactataggattgaggataaagaagaaaaagttttaactcca
tcagatgttagagaaatcttagaaaaaatcccagatgaagattgtatattgttaggatta
aatccagaaactacaaggcctgaatggatggttttaactgtccttccagtaccacctgta
actgttagaccatcaataacattagaaactggagagagaagtgaggatgacttaacacat
aaattagttgatataattagaattaacaacagattagaagaaaacattgaaggaggagcc
cctaatttaattattgaagatttatggaatctcttacagtatcatattaatacatacttc
gataatgaagccccaggaattcctcctgctaagcatagaagtggaagaccattaaaaact
ttagctcagagattaaaaggtaaagaaggaagatttagatataatttagcaggtaagaga
gttaatttctcagcgagaactgtaatttctccagatccatgtttaagtatcaacgaagtt
ggtgttccagaggttattgctaaggaattaactgttccagagaaagttactaagtttaat
attgaaaaaattaaaaagttgttgaaaaatggacctaataagcatccaggagttaattat
gtaattaggaaaatgattggtaaggatggaaaagagcatgaatttaaagttaaaataact
gagagtaataaagatttctggatagaaaatatacgagaaggagatatagttgaaagacac
ttaatggatggagatattgtattatacaacagacagccatcattacacagaatgtctata
atggggcataaagttagagttcttccatatagaacatttagacataatttatgtgtctgt
cctccatataacgctgactttgatggagatgaaatgaacctacatgttcctcagtctgaa
gaaagtagagctgaagcagagagtttaatgcttgtagaaaaacatattctatctccaaga
tttggaggaccaataattggagcaatacatgattttatctcaggagcttatatcttaact
tcaaattactttacgaaagatgaggctactttaatactaagaagtgggggaataaaggaa
gagttgtgggagccagacaaaatagaaaatggtgttccactatattctggtaaaaagata
tttagtaaagcactaccaaagggtttgaatttaagatacaaagcaaaaatatgtagaaaa
tgtgatgtttgtaaaaaagaaaattgtgaatatgacgcatatgttgttataaaagatggt
gagttagttaaaggagttatcgacaaaaacggttacggagcagaggctgggttgatattg
catacaatagttaaagaatttggtccagaggctggaaggaagttccttgactctacaaca
aagatggctataagagcaataatgttaagaggtttttcaacaggtattgacgatgaagat
ctgccagaagatgctttaaaagaaattgagaaagtattagatgaagcagagaaaaaagtt
aaagaaattattgaaaaatatgaaagaggagaacttgacctattgccaggattagacttg
gaagaatcaagagaggcatatataaacaatgtattaagagaggctagagataaagctggt
caaatagctgagagatatttagggatggacaatcacgcagttattatggctgttacagga
gcaagaggtaatatattaaacataacacagatggcggcttgtttaggacagcagtctgtt
agaggaagaagaatatttagaggatataggggaagagttctgcctcactttgaaaaaggt
agtttagatgcaagatctcacggattcgttagaagtagttataaaaaaggtttaagtcca
acagaattcttcttccacgctatgggaggtagagaaggtttagtcgatcaggcagttaga
acagctcagtcaggatatatgcagagaagattaattaatgctttacaagatttaaaaact
gaatttgatggtgttgttagagattcaagaggaataataattcaatttaagtatggagag
gatggagtagatccaatgctcgctgatagaggtaaagctgtaaatattgacagaattata
gacaaaattaaaatgagatacaataaataa
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