Methanocaldococcus lauensis SG1: MLASG1_1505
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Entry
MLASG1_1505 CDS
T07808
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mesa
Methanocaldococcus lauensis SG1
Pathway
mesa03410
Base excision repair
mesa03430
Mismatch repair
mesa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MLASG1_1505
03430 Mismatch repair
MLASG1_1505
03440 Homologous recombination
MLASG1_1505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesa03400
]
MLASG1_1505
DNA repair and recombination proteins [BR:
mesa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MLASG1_1505
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MLASG1_1505
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MLASG1_1505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
DHH_CID
Motif
Other DBs
NCBI-ProteinID:
CAB3290135
LinkDB
All DBs
Position
I:1395512..1396810
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AA seq
432 aa
AA seq
DB search
MIEKIKEIENVTKAIKEKILNHNGYIRIITHHDPDGLSSGGILAKILMRSNKLFHLTVVE
HLSDNVIQKLVKENEVNKPLFIFADMGSGQIDNIIENNFNAIILDHHPPIIKESFVNENI
IQLNPHIFGVDGSKELTASGVCYLVAREFGYYDLSSLAIVGIIGDMQYRPLLGLNKFIVN
EAREHRYVKIVSDLIYNIYDVEIHKSIAYCTKPYIPELASEIKAFKFLKDIGIDPNKKRF
DDSDRKKFLSAIIFKYPKIENLIIDRYLINHKVNDAMLLSEMLNAVGRSGLFAVGIGICL
EDDECIKKGYEILWEYKKNLVNELKNVKLKKLNNIYYFEGKKGMIGIIASILVDDKPVIG
YHIEGDLAKFSARGNRELVERGLDLSIAMAVAKEFGGTGGGHNVASGAVVPKDKVKDFLN
RVDEIIGEQLKK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaaaaattaaagaaatagaaaatgttactaaggcaattaaagaaaaaattctt
aatcataatggatatattagaattataacccatcatgatccagatggattgagtagtgga
ggaattttagctaagatattgatgagatccaataaattgtttcatttaaccgttgtagaa
catttgtcagataatgttattcaaaaattagtaaaagaaaatgaagtaaataagcctcta
tttatatttgcagatatgggaagtgggcagatagataatattatagagaataactttaat
gcaataatattagatcatcaccctccaataattaaagaaagttttgtaaatgaaaatatc
attcaactaaatccacatatttttggagttgatggctctaaagaattaactgcaagtgga
gtttgctatttagtagcaagagaatttggatattatgatttgagtagtttagcaattgta
ggaattattggagatatgcagtatcgtccattgttaggattaaacaagtttatagtaaat
gaggcaagagagcatagatatgttaagattgtgagtgacttaatttataatatttatgat
gtcgagatacataaatctatagcatactgcactaaaccttatattccagagttagcctct
gaaataaaagcatttaaattcttaaaagatataggtatagatccaaataaaaaaagattt
gatgattctgatagaaaaaagttcctctctgcaataatatttaagtatccaaaaattgaa
aatttaataattgacagatatttaataaatcataaagttaatgacgctatgctattgtct
gaaatgttaaatgccgtaggtagaagtggtttatttgctgtaggtataggaatttgctta
gaagatgatgaatgtataaaaaaaggatatgaaattctttgggaatataaaaagaactta
gttaatgagttaaaaaatgtcaaactaaagaaattaaataatatttattattttgaaggt
aaaaaagggatgattggaattattgcctcaatattggttgatgataagccagtaataggg
tatcatattgagggtgatttagctaagttttcagcaagaggtaatagagagttagttgag
agaggtttagatttaagtattgctatggctgtggctaaagagtttggaggcactggggga
gggcataatgttgcttctggggcagttgttccaaaagataaagttaaagattttttaaat
agagtagatgagattataggagagcaactaaaaaaataa
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