Methanocaldococcus lauensis SG1: MLASG1_1574
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Entry
MLASG1_1574 CDS
T07808
Symbol
lig
Name
(GenBank) DNA ligase
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
mesa
Methanocaldococcus lauensis SG1
Pathway
mesa03030
DNA replication
mesa03410
Base excision repair
mesa03420
Nucleotide excision repair
mesa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mesa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MLASG1_1574 (lig)
03410 Base excision repair
MLASG1_1574 (lig)
03420 Nucleotide excision repair
MLASG1_1574 (lig)
03430 Mismatch repair
MLASG1_1574 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesa03032
]
MLASG1_1574 (lig)
03400 DNA repair and recombination proteins [BR:
mesa03400
]
MLASG1_1574 (lig)
Enzymes [BR:
mesa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MLASG1_1574 (lig)
6.5.1.6 DNA ligase (ATP or NAD+)
MLASG1_1574 (lig)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
MLASG1_1574 (lig)
DNA replication proteins [BR:
mesa03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
MLASG1_1574 (lig)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
MLASG1_1574 (lig)
DNA repair and recombination proteins [BR:
mesa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
MLASG1_1574 (lig)
NER (nucleotide excision repair)
Other NER factors
MLASG1_1574 (lig)
MMR (mismatch excision repair)
Other MMR factors
MLASG1_1574 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
mRNA_cap_enzyme
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
CAB3290244
LinkDB
All DBs
Position
I:complement(1452533..1454266)
Genome browser
AA seq
577 aa
AA seq
DB search
MLWKDVCEIFDKIEKTTKRLEKRDLFIKLIDMVKEKGTPEDLKKICYMAIGRVYPEYDER
ELGIGEKLLINAVTSIGIKKDELLEKIKETGDIGLAIEKLKSKIKQSYLFFQPLTVDEVY
NTLKRVGEIEGEGSVKKKLRLISSLFLRASPIECRYLARLILEDMRIGMNVPTILEALSV
YFNVPKEKLEKLYAITNDIGLLAEKLLRGNLDDEELKLKIFRPIKPMLAQIAPSIEEALL
EMGRAQFETKYDGARVQIHKDKDKVKIYSRRLEDVTNALPEIVEAIKKINVDQLIVEGEC
VAIDKNTGKPRPFQDILRRFRRKYDIGKIMKEINLRVYLFDILYKNGESFIDEEFENRRK
VLEEIVGYENDWRTERERIEKELRSDKIIDISYKLVTNDPKEAKEFYNWSLSIGHEGVMI
KNLKAPYTPGSRVRTMYKFKPTLENLDVVITKAKRGMGKRKDWYGSFEICVRDEEGNLYP
IGHVGTGLTESDLEMLKEEIDKIIIRDLGDEVEVEPKIVIEVAYEEIQKSDKYPCGYALR
FPRVVRFRFDKGKDDINTIEDVKRIYEIQRGRKQNNK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgctatggaaagatgtttgtgaaatatttgacaaaattgaaaaaaccactaaaagattg
gaaaaaagagatttatttataaaattaattgatatggttaaagaaaaaggaacgccagaa
gatttaaaaaagatttgttacatggcaataggtagagtttatccagaatatgatgaaaga
gaattaggaattggagaaaaacttttaattaatgcggtaacatcaataggaattaaaaaa
gatgaattattggagaaaattaaagaaactggggatattggtttagctattgaaaagtta
aagtcgaaaattaagcagtcctatttattttttcagcctttaactgtagatgaagtttat
aatacattaaagagagttggagagattgaaggagaaggttcagtaaagaaaaagttgaga
ttaataagtagtttatttttaagagcgtcaccaattgagtgtagatatttagcgaggtta
atattggaggatatgagaatagggatgaatgttcctactatattggaggcactttcagtt
tatttcaatgtgcctaaggaaaaattggaaaaattatatgctataaccaatgatattggg
cttttagctgagaaattattaagaggaaatttagatgatgaagaattaaaattaaaaata
tttagaccaataaaacctatgctggcacaaattgctccatcaattgaagaggctttatta
gaaatgggtagggcacaatttgagacaaagtatgatggagcaagagtccaaatacacaaa
gataaagataaagttaaaatttacagtaggagattggaagacgttacaaacgctctccct
gaaattgtagaggctattaaaaaaattaatgtagatcagttaattgttgaaggagaatgt
gtagcaattgataaaaatactggaaagccaagaccatttcaagatatccttaggaggttt
agaagaaagtatgacattggaaagataatgaaggaaattaatttgagagtttatttattt
gacatactttataaaaatggagaatcatttattgatgaagagtttgaaaatagaagaaaa
gttttagaggaaattgttggttatgaaaatgattggagaactgaaagggaaagaatagag
aaagaactgagatcagataaaattattgatatatcttataagttagttactaacgatcca
aaagaggctaaagagttttataattggagtttatctatagggcatgagggagttatgatt
aaaaatctaaaagccccatatactccgggaagtagagttagaactatgtataaatttaaa
ccaactcttgaaaatttagatgttgtaattacaaaggctaaaaggggaatgggtaagaga
aaagattggtatggttcttttgaaatttgtgttagggatgaagaaggtaatttatatcca
atcggacatgtaggaactggattgactgaaagtgacttagaaatgttaaaagaggagatt
gataaaataattattagagacttaggagatgaggtagaagttgagccaaaaattgttatt
gaagttgcttatgaagaaatacaaaaatctgataagtatccctgtggatatgctttaaga
ttcccaagagttgtaagatttagatttgacaaaggtaaggatgatataaacacaatagag
gatgtaaaaagaatttacgaaattcaaagaggtagaaaacagaataataagtaa
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