Methanogenium sp. S4BF: L1S32_00605
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Entry
L1S32_00605 CDS
T09590
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mesb
Methanogenium sp. S4BF
Pathway
mesb03022
Basal transcription factors
mesb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mesb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
L1S32_00605
09124 Replication and repair
03420 Nucleotide excision repair
L1S32_00605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesb03021
]
L1S32_00605
03036 Chromosome and associated proteins [BR:
mesb03036
]
L1S32_00605
03400 DNA repair and recombination proteins [BR:
mesb03400
]
L1S32_00605
Enzymes [BR:
mesb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
L1S32_00605
Transcription machinery [BR:
mesb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
L1S32_00605
Chromosome and associated proteins [BR:
mesb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
L1S32_00605
DNA repair and recombination proteins [BR:
mesb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
L1S32_00605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
ResIII
AAA_22
AAA_16
DEAD
Motif
Other DBs
NCBI-ProteinID:
WFN34656
LinkDB
All DBs
Position
119293..121296
Genome browser
AA seq
667 aa
AA seq
DB search
MGVRGDYFPYGSYRPHQEDMLDMAAACAREGGIGMIDAPTGCGKSSVVSALLEEANGRKV
IVAVRTVSQLNTFVRELELVRKKHPNLRYSYLVGKRQMCPMGGEGDTYRVCEGLKAFSTS
LMRERARKGAHVPANDKIIDEQVRKQDVDHPLLCPYFIRSRVFIEGADGLRMVPSGTLKT
RADQVARTQVSPDRLHEFSKGLCPYEVMLQAARDADVILLNFHHLFNTDIRDQLYQSLGI
EAENALLLVDEAHNCGDTVESIQSVTLFRASLDQGMIELGRMRGRVSGVDALLNMLPRVG
QFMDSLQRSFKEEDWFDPATFVRFVLSGSLYQRIDEIVDDLLKAEETYHEAQKQAGDFKE
SAVERLTAFFYRIMRALDDPAFLTLYRKKGEEISLQVRNIDPSSTMKDIASYHACAIFIS
GTLSPVDRYRRLYFEDLPVKTLSLPNAFPRENRALFCARDVTSTYRMRRDAGNTERIEGY
IRSFAALPGSLAVYFPSYELLERFTARLPSRLNRKKVFIESSSSSDAAGDLREFMSLPSR
GEFGILFGVCGGKWSEGLDYRGELLSGALVFGLPLAPFTEVRRMTNQYFKNKFGREGEFI
SYTMPAINRVLQALGRVLRTPEDRGVLLIGESRFLEDEVHSGLPPWMQEEMVPCTLSSFI
EEAKSWR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcagaggtgactattttccgtacgggtcataccgtccccaccaggaagatatg
ctggatatggcagctgcctgtgcacgggaaggcggcatcgggatgattgatgccccgaca
ggctgcggtaaatcaagtgtagtttcagccctccttgaagaggcaaacggcagaaaagtc
attgtcgcagtacggacggtcagtcagctcaatacgtttgtgcgtgaacttgaactcgtc
cggaaaaaacatccgaatctgcggtactcctatcttgtcggcaaacgccagatgtgcccg
atgggaggagagggggacacctatcgtgtctgtgagggactgaaggcattctccacttcc
ctgatgcgcgaacgtgcgcggaaaggtgcacatgtaccggccaatgacaaaatcattgac
gaacaggtccggaaacaggatgtggaccaccccctcctgtgcccctatttcatccggagc
cgggtctttattgagggagcggacggtctgcggatggtgccctcagggaccctcaagacc
cgtgctgatcaggtggcacggacacaggtttcacccgatcgacttcatgaattctccaaa
ggtctctgtccgtatgaggtaatgctgcaggctgcacgggatgctgatgtgatactgctc
aatttccaccatctctttaacacagacattcgtgaccagctgtaccagtcgctgggtatt
gaagcggagaatgccctgcttctggttgatgaggcgcacaactgcggagataccgttgag
agcatccagtctgtcacgctcttccgtgcttcgcttgatcagggcatgattgaactggga
agaatgcgggggcgtgtctcaggagtcgatgccctcctgaatatgctgccccgtgtcggg
cagtttatggactccctgcagcggtcattcaaggaagaggactggtttgaccccgcgacc
tttgtccgctttgtgctttccgggagcctctatcagcgcattgatgaaatagttgacgac
cttctcaaggcggaagagacgtatcatgaggcgcagaaacaggcgggtgacttcaaagag
agtgctgtggagcggctgactgcctttttctaccggattatgcgggcgcttgacgaccct
gcctttctcactctctaccggaagaagggggaggagatctctcttcaggtgcgcaatatt
gacccctcatcaaccatgaaggacattgcatcctatcatgcctgcgccatttttatcagc
ggcacgctttctccggtggacaggtatcggcgcctctattttgaagaccttccggttaag
actctcagccttccaaatgcgttcccacgcgaaaaccgtgcgcttttttgtgcacgggac
gtcacctccacctaccggatgcggcgggatgccggaaatacggagcgtattgaggggtat
atccgcagttttgcggctcttcccggaagtctggccgtatatttcccgtcatatgaactg
ctggagcggttcacagcacgcctcccgtcacgcctgaaccgaaagaaggtctttattgaa
tcatcgtcatcatcggatgcggcgggtgacctccgggagtttatgtccctcccgtcccgc
ggggagtttggtattctttttggtgtctgcggcggaaaatggagtgaagggctggattac
cggggggaactgctatccggtgctctggtattcggcctgccgcttgcgccgttcacggaa
gtgcggcggatgacaaatcaatatttcaaaaacaaattcgggcgggagggggagttcatc
tcgtacaccatgcctgccataaaccgggtcctgcaggcgcttggccgcgtgctgcgcaca
ccggaagaccgtggtgttcttcttataggggaaagccggtttcttgaggatgaagtccat
agtggtcttcccccctggatgcaggaagagatggtgccatgcacgctctcctcgtttatt
gaagaggccaaatcgtggcgctga
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