Methanogenium sp. S4BF: L1S32_00730
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Entry
L1S32_00730 CDS
T09590
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mesb
Methanogenium sp. S4BF
Pathway
mesb00300
Lysine biosynthesis
mesb00470
D-Amino acid metabolism
mesb01100
Metabolic pathways
mesb01110
Biosynthesis of secondary metabolites
mesb01120
Microbial metabolism in diverse environments
mesb01230
Biosynthesis of amino acids
Module
mesb_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mesb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
L1S32_00730 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
L1S32_00730 (dapF)
Enzymes [BR:
mesb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
L1S32_00730 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WFN34680
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Position
142661..143482
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AA seq
273 aa
AA seq
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MEIPFVKLEGNGNDFVLIDEMDGPVIPDEMKGEFARLYCDRRFGIGADGVLFVSPSDSCD
VRMRLFQPDTSEAEMCGNGIRCLAKYVYDSEYTGGECTVETQAGVMPVTMSYSDEGEFTA
TIDMGPAKFMSADIPAAGEGEFRMEYDGFTVYAANTGVPHAVVFVDDVEAVNVNEVAPGI
RSNPVFPEGANVNFVQCDGEDSITIRTFERGVEEETYSCGTGSTAAAAVAHHLGKMPATV
HVQTRGGPLTIVMNETITMEGPAVTVFEGIIPL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggaaattccgtttgtcaaattagagggtaatggtaatgattttgtgcttatcgatgag
atggacgggccggtaatccccgatgaaatgaagggagaatttgcccgtttatactgcgac
aggcgctttggcatcggtgcggatggagttctttttgtatccccctctgattcctgtgac
gtacggatgcgccttttccagccggatacgagtgaagctgagatgtgtggaaatggcatt
cgatgcctcgccaaatatgtatatgattctgaatacacggggggagagtgcacggttgaa
acacaggccggggtgatgccggtcaccatgtcttacagtgatgagggtgaatttaccgcc
acgattgacatgggtcctgcaaaatttatgtcagccgatattcctgccgcaggagagggg
gaattcaggatggagtatgatgggtttaccgtctatgctgccaatacgggtgttccgcat
gcggttgtctttgttgatgatgtggaagcggtcaatgtcaatgaagtggcacccggtatc
cgttcaaacccggtgtttcccgaaggtgcgaatgtaaacttcgtccagtgcgacggcgaa
gacagcatcacgatacgaacatttgaacgtggtgttgaggaagagacatattcatgtggc
accggttcaacagcagccgcagccgtggcgcaccatctcggaaagatgccggcaaccgtc
catgtccagacacggggcggacctctgacaatcgtgatgaatgagacaattacgatggaa
ggtccggcagtaacggtttttgagggaattattcctctctga
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