| Entry |
|
|---|
| Symbol |
thpR
|
|---|
| Name |
(GenBank) RNA 2',3'-cyclic phosphodiesterase
|
|---|
| KO |
|
|---|
| Organism |
mesb Methanogenium sp. S4BF
|
|---|
| Brite |
KEGG Orthology (KO) [BR:mesb00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:mesb03016]
L1S32_01515 (thpR)
Enzymes [BR:mesb01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
L1S32_01515 (thpR)
Transfer RNA biogenesis [BR:mesb03016]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
L1S32_01515 (thpR)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
305455..306018
|
|---|
| AA seq |
187 aa
MNSTIDMYMVRAFFAVELTDDIRNQFYAVQDILRNSDAKVTCVDPALAHITMKFLGEISD
DVMESVQEIMSEFTFKPTLITVSGVQLHPKKRPRIVWADVTDGGWGEATVAEMDRLLAPL
GIVSEDRKFTPHVTLGRIKHYDRSLRAAVEEISGYTFGQMTVDTITLKKSTLTPGGPIYE
DIMEVKA |
|---|
| NT seq |
564 nt +upstreamnt +downstreamnt
atgaacagtacaatagatatgtatatggtccgggctttttttgctgttgaactcactgat
gatatcaggaaccaattctatgctgtgcaggatattctcaggaacagtgatgcaaaagta
acctgtgttgatcccgctcttgcgcatattaccatgaagtttctgggggaaatttctgat
gacgtaatggagagcgtacaggaaataatgtctgaattcacatttaaaccgactttgatt
accgtatccggagttcagcttcatcctaaaaagcgtcccaggattgtctgggctgatgta
acggatgggggatggggtgaggcaacggttgctgaaatggatcgtctgcttgctcctctg
ggcattgtatctgaagacagaaaattcacccctcatgtaacactagggcgtatcaaacac
tatgatcgttcactgcgcgctgctgtagaggagatatcagggtatacatttgggcagatg
actgtcgataccattactcttaaaaaaagtacactcacaccgggtgggccgatatatgaa
gatattatggaggtgaaggcatga |
|---|
