Methanogenium sp. S4BF: L1S32_02245
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Entry
L1S32_02245 CDS
T09590
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
mesb
Methanogenium sp. S4BF
Pathway
mesb00220
Arginine biosynthesis
mesb00240
Pyrimidine metabolism
mesb00250
Alanine, aspartate and glutamate metabolism
mesb01100
Metabolic pathways
mesb01110
Biosynthesis of secondary metabolites
mesb01240
Biosynthesis of cofactors
Module
mesb_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
mesb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
L1S32_02245 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
L1S32_02245 (carB)
00220 Arginine biosynthesis
L1S32_02245 (carB)
Enzymes [BR:
mesb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
L1S32_02245 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
MGS
CPSase_L_D3
ATP-grasp
ATPgrasp_Ter
Dala_Dala_lig_C
ATP-grasp_3
MerR-DNA-bind
ATP-grasp_5
DUF6549
Epimerase
Motif
Other DBs
NCBI-ProteinID:
WFN34962
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Position
452697..455864
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AA seq
1055 aa
AA seq
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MPLRPEIKKVLLIGSGPIQIGQAAEFDFSGSQACRALREEGVEVVLVNSNPATIQTDPEM
ADVIYVEPIRSEIIAKIIQKEKPDGILSGMGGQTGLNMTAELAEMGALEGVEILGTPLEA
IYRGEDREQFRDLMNCIGEPVPRSMILRDMSQLDQALETVGLPAIIRPAYTLGGAGGGVA
YTAEDLKRIVEMGLQRSRIHQVLIEESVIGWKEIEFEVMRDAADTCIIICGMENVDAMGI
HTGESVVVAPILTLRDDEFQKLRTASIKIIRALDVQGGCNVQLAYKDGDYRVIEVNPRVS
RSSALASKATGYPIARVAAKVAIGLNLDEITNTVTGCTPASFEPAIDYVVVKVPRWPFDK
FPNADRTLTTAMKSTGEVMAIGRTLEEAFKKAMRSLDTDIHSHTSESEIRMLLANPTDER
FGCIFDAFRVGFSVAEVANLTFIAPFFLEKMRNIVLMEQTLAAGNPSNETIRAARRAGFS
SEEIATLSGLSEETVGDVGGMPTYKMVDTCAAEFPATTPYFYSTWEDENEIVPDEKEKVL
ILGSGPIRIGQGIEFDYCTVHAVMALREEGVEVHIVNNNPETVSTDYDTSDRLFFEPMTL
EDVTNILKSDNYAGVMVQFGGQNSVNLALPLERAVQSGNLKTKIFGTAPDAMDMAEDRER
FSELLEELSIPSPANGSAYSEEEAFAIARKIGFPLLVRPSYVLGGRAMELVHDEIELQTY
IREAVRVSRKHPVLLDSFLQNAIEIDVDAVCDGTDVLIGGIMEHIEEAGVHSGDSACVIP
PQSLTANVIETVREHTRNLAVGIGVVGLINIQFAVKDEVVYILEANPRASRTVPFVSKAT
GLPLAKIAAKVMLGKKLADMGYTEPVMSHVAVKEVLLPFNKLPGVDIVLGPEMKSTGEVM
GIDYDFGRAYYKACLSADNELPLEGNVFISVGTENKEGILPAAQNLHELGLKIFGTEGTV
AFLESQGIPASLVRKVQEGSPNVIDVMRRGELRLIINAPAGKYSRQDHVRIMRAALDYNI
PYITTIQAANAAAQAIRSLKKDSITIEPLSHYHHG
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgagaccagaaatcaagaaagtgctcctgataggctcgggtccgattcagata
ggacaggccgcagagtttgacttctccgggtcgcaggcatgccgtgcactccgtgaggaa
ggagtagaggttgtgcttgtcaactccaatcccgcaaccattcagaccgacccggagatg
gcggatgtcatctatgtggagccaatccgctcggagatcattgcaaagatcatccagaag
gagaagccggatggcattctctccgggatgggcggccagaccggcctcaatatgacggca
gaactggctgagatgggcgctcttgagggtgtggagatcctcggcaccccactggaagcc
atctaccgcggtgaagaccgggaacagttccgtgacctgatgaactgcatcggtgaacct
gtcccccggagcatgatcctcagggatatgtcccagctggatcaggcgctcgagactgtc
ggtcttcccgccatcatccgacctgcctacacccttggtggtgccggcggcggtgtggcc
tacacggcagaagacctgaaacggattgtggagatgggtctgcagcgctcccgtatccac
caggtgctcattgaagagagtgtcatcggctggaaggaaatcgagtttgaggtgatgcgc
gacgctgctgatacctgcatcatcatctgtggcatggagaatgtcgatgcgatgggcatc
cacaccggcgagagtgtggtcgttgcacctatcctgaccctgagagacgatgagttccag
aagctgcggacggcatccataaagatcatccgggcacttgacgtgcagggcggctgtaat
gtccagctcgcgtacaaggacggtgactaccgggttatcgaggtcaacccgcgtgtgtca
cggtcttcagcactggcatccaaggcgaccggatacccgattgcccgtgtggcggcaaag
gttgccatcggcctgaacttagacgagatcacgaacacggtcaccggatgcacccccgca
tcctttgaacctgcgattgactatgtggttgtgaaggtgccgcggtggccattcgataaa
ttcccgaatgcagaccggacactcaccacagcgatgaagtcaaccggtgaagtgatggcc
atcggccgtacgctggaagaggcgtttaaaaaggcgatgcggtctctggataccgatatc
cattcccatacctctgaatcggagatccgtatgcttcttgcaaacccgaccgatgaacgg
ttcgggtgcatctttgatgcgttcagggttggattctccgtcgctgaagtggcgaacctg
acctttatcgcaccctttttcctggagaagatgcgcaatatcgtgctgatggagcagacg
cttgcggcaggcaacccctcgaatgaaaccatccgggcagcccgccgggccggcttctcc
tcagaagagattgcgaccctctccggcctctccgaagagacggtgggggatgtgggcggt
atgcctacctataagatggtcgatacctgcgccgccgagtttccggcgaccacaccctac
ttctactcaacctgggaagatgagaacgagattgtccccgatgaaaaagagaaagtcctc
atcctcgggtccggccccatccgtatcgggcagggtattgagtttgactactgcacggtg
catgcggtgatggccctccgtgaggaaggcgtcgaggtgcatattgtcaacaacaaccct
gagaccgtctcgactgactatgacacctccgaccggctcttctttgagccgatgacactt
gaggatgtcaccaacatcctgaagtccgacaattatgccggtgtgatggtccagttcggc
ggccagaactctgtcaaccttgccctgccgctggagcgggcggtgcagtccggaaacctg
aagaccaaaatattcggcactgccccggatgcgatggacatggcagaggaccgggagcgg
ttcagcgagcttttggaagaactcagtatcccgtcacctgcgaatggttctgcctactcc
gaggaggaggccttcgccatcgcccggaagatcggatttccgcttctggtgcggccgtcc
tatgtgcttggcgggcgtgcaatggagcttgtccacgatgagattgagctgcagacctat
atccgtgaggcggtgcgggtcagccggaagcatccggtactcctcgactcattcctccag
aatgcaatcgagatcgatgtggacgcggtctgcgacgggacagatgtccttatcggaggc
atcatggagcacatcgaagaggccggtgtgcactccggtgactctgcctgcgtgattccg
ccccagtctcttaccgcgaacgtgattgagacggtgcgggagcatacccgaaatcttgcc
gtgggcattggcgtggtcgggctcatcaacatccagtttgcggtgaaagatgaggtggtg
tatatccttgaggccaatccgcgggccagccggacggttccctttgtctcgaaggcaacc
ggtctgccgcttgcaaagattgccgcaaaggtgatgctcggcaagaaactggctgatatg
gggtataccgagccggtcatgtcccatgttgccgtaaaagaggtgctgctgcccttcaac
aagctccccggtgttgacattgttcttggcccggagatgaaatcaacgggtgaagtgatg
ggcattgattacgacttcggccgtgcctactacaaggcctgcctctcagcggacaatgaa
ctgccgctggaaggcaacgtcttcatctcggtcggcacggaaaacaaggaggggatcctc
cccgcagcacagaacctgcacgaactgggcctgaagatcttcggaaccgaagggacggtt
gcattcctcgagtcccagggtattcctgcaagcctcgtgagaaaggtgcaggaaggctca
cccaatgtcattgatgtgatgcgcaggggagaactgcggcttattatcaacgcacccgcc
ggaaaatactcccggcaggaccatgtccgtatcatgagggcggcgcttgactacaatatt
ccgtatatcaccactattcaggcggccaatgcggcagcccaggcaatccgcagcctgaag
aaggattcaatcacgattgagcctttatcgcattatcatcatggctaa
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