KEGG   Methanogenium sp. S4BF: L1S32_02655
Entry
L1S32_02655       CDS       T09590                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
mesb  Methanogenium sp. S4BF
Pathway
mesb03030  DNA replication
mesb03410  Base excision repair
mesb03420  Nucleotide excision repair
mesb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mesb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    L1S32_02655
   03410 Base excision repair
    L1S32_02655
   03420 Nucleotide excision repair
    L1S32_02655
   03430 Mismatch repair
    L1S32_02655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mesb03032]
    L1S32_02655
   03400 DNA repair and recombination proteins [BR:mesb03400]
    L1S32_02655
DNA replication proteins [BR:mesb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    L1S32_02655
DNA repair and recombination proteins [BR:mesb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     L1S32_02655
   MMR (mismatch excision repair)
    Other MMR factors
     L1S32_02655
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    L1S32_02655
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: WFN35036
LinkDB
Position
542954..543697
AA seq 247 aa
MLKAAIDTDTFRETIDVIAALVTECRMHVGEDGLKTRAVDTANVAMISLDLSQEAFSSFV
ATESELGIDITKMKNIIGMMGKGDVLSLELPEDGHKMEMVFSGYQYSVTLLDVNTIRKDP
QPPTIELPAKVRISGAAINDGIKAASVVSDKIALGVDTATGTFYMEAEGDSDHIRLERAG
DELISLEPADVRSLFSLDYLRDMGKVMARADEVEVQIGNDHPVRVSFDFADGHGHVDFLL
APRIEAD
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttaaaagcagccattgatacagataccttccgggagacaatagatgtcattgcagcc
ctcgtcaccgagtgccgcatgcacgtcggggaagacggactgaagacgcgcgcagtagac
actgccaatgtagccatgatctcactcgacctcagtcaggaggcattttcgtccttcgtt
gcgacggagagtgaactcggcatcgatatcaccaagatgaaaaatatcatcggcatgatg
ggaaaaggagacgtattgtcccttgaactcccggaagacgggcacaaaatggagatggtc
ttctccgggtaccagtactcggtcaccctccttgatgtcaataccatccggaaagacccc
cagccgccgaccattgaactgccggcaaaggtccgcatctccggtgcggcaataaacgac
ggcatcaaggcagcctcggtggtctctgacaagattgcgctgggtgtcgacaccgccacc
gggaccttctacatggaggcagaaggggactcggatcacatccggcttgagcgcgccgga
gacgaactcatctcacttgagccagcagacgtccggtcactcttctccttagactacctc
cgtgatatgggcaaagtgatggcgcgggccgatgaggtggaagtccagattggaaatgac
caccccgtcagggtgtcctttgactttgcagacggtcacgggcatgttgatttcctcctt
gccccccgcattgaggcagattga

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