Methanogenium sp. S4BF: L1S32_04240
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Entry
L1S32_04240 CDS
T09590
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mesb
Methanogenium sp. S4BF
Pathway
mesb00521
Streptomycin biosynthesis
mesb00523
Polyketide sugar unit biosynthesis
mesb00525
Acarbose and validamycin biosynthesis
mesb00541
Biosynthesis of various nucleotide sugars
mesb01100
Metabolic pathways
mesb01110
Biosynthesis of secondary metabolites
mesb01250
Biosynthesis of nucleotide sugars
Module
mesb_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mesb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
L1S32_04240 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
L1S32_04240 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
L1S32_04240 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
L1S32_04240 (rfbB)
00525 Acarbose and validamycin biosynthesis
L1S32_04240 (rfbB)
Enzymes [BR:
mesb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
L1S32_04240 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
adh_short
KR
NmrA
Motif
Other DBs
NCBI-ProteinID:
WFN35338
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All DBs
Position
complement(870978..871949)
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AA seq
323 aa
AA seq
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MHLLVTGGSGFIGSNFIRHMLESHPTISVTNLDVLTYAGNPANLRDIEDDSRYAFVQGDI
CDRAVVDGVLDQYHIDTVVHFAAESHVDRSIADGSVFVKTNVLGTFTMLDAALAHGIERF
IHVSTDEVYGSTREGSFVETDNLNPSSPYSSTKAGSDLLALSYWHTHRLPVIVTRCTNNY
GPFQYPEKLIPLFATNLMEGKKVPIYGTGENVRDWLFVTDHCRAIDFLLENGKPGEAYNI
GGGEEKTNLEITHTILRALGKDESMIEYVEDRKGHDFRYSLDFSKLRRIGWEPAFPFDEA
MTATVRWYGENEWWWRPLKEGAR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgttggtcacaggggggtccggtttcatcggcagcaattttatccgccatatg
ctggagagccatcccacgatttcagtcacgaaccttgatgtcctcacctacgccggcaac
ccggcgaacctcagggacattgaggacgattcccgctacgcgtttgtacagggcgacatc
tgcgaccgggcagtcgtggatggggtgctggatcaatatcacatagacacggtggtccac
ttcgcagcggagagccatgtggatcgttccatcgccgacggatcggtctttgtgaagacc
aatgtgcttgggacctttacgatgctggacgcagcccttgcccatgggatcgaacggttc
atccatgtctcaactgatgaagtctacggaagtactcgtgagggatcttttgttgagacc
gacaatctgaatccctcgagtccctattcatcgaccaaggcggggtccgacctcctcgcc
ctctcatactggcacacacaccggctgccggtgatcgtcaccagatgcacgaacaattat
gggcctttccagtatcctgaaaagctcattcccctttttgcgacgaatctcatggagggg
aagaaggtccctatctacggaaccggggagaacgtccgcgactggctctttgtcactgac
cactgcagggctatcgactttcttctcgaaaacggtaagcccggtgaggcatacaatatc
ggcggcggtgaggagaagacgaacctcgaaattacgcatacaattcttagggcgctcggc
aaggatgagtcgatgattgagtatgtcgaggatcggaaagggcatgacttccgctactcg
ctcgacttttccaagctccgcaggataggctgggagcccgcatttccctttgacgaggcg
atgacggcgacagtccggtggtatggtgagaacgaatggtggtggcgcccactaaaggaa
ggggcccgatga
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